Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H18
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157...    29   3.8  

>02_05_0366 -
           28313190-28313601,28313759-28314225,28315044-28315782,
           28316548-28316615,28316693-28316757,28316922-28320162,
           28320239-28320301,28320756-28320824,28321020-28321055,
           28322035-28322280,28322531-28322569,28322695-28322816,
           28322921-28323004,28323100-28323235,28323486-28323535,
           28323620-28323756,28323863-28323951,28324847-28324954,
           28325080-28325163,28325841-28325888,28326036-28326153,
           28328262-28328347
          Length = 2168

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = -1

Query: 197 YSTTITQSLITDHCRNQGVDSRRISEEQRAQDVAREGAHAPGPT 66
           YST + ++L+    +NQ  DS + ++  + Q++A+E  +A  PT
Sbjct: 179 YSTMLAENLVDVRLQNQENDSLQTNQRSQ-QELAQENINASSPT 221


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,700,440
Number of Sequences: 37544
Number of extensions: 261531
Number of successful extensions: 516
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)