Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H17
(882 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 174 2e-42
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 173 4e-42
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 169 8e-41
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 146 7e-34
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 145 1e-33
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 122 9e-27
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 120 5e-26
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 119 1e-25
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 117 5e-25
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 113 7e-24
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 113 7e-24
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 111 2e-23
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 106 6e-22
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 105 2e-21
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 93 1e-17
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 93 1e-17
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 91 3e-17
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 88 2e-16
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 82 2e-14
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 77 8e-13
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 74 4e-12
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 73 1e-11
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 73 1e-11
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 72 2e-11
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 72 2e-11
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 70 7e-11
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 70 9e-11
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 68 3e-10
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 67 5e-10
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 66 1e-09
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 66 1e-09
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 64 3e-09
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 62 1e-08
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 62 2e-08
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 61 4e-08
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 57 9e-08
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 56 1e-06
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 56 2e-06
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 55 2e-06
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 53 8e-06
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 53 1e-05
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 50 1e-04
UniRef50_Q2H8Y4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1; ... 35 3.2
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 35 3.2
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_A7T9I2 Cluster: Predicted protein; n=1; Nematostella ve... 34 4.2
UniRef50_A7S712 Cluster: Predicted protein; n=1; Nematostella ve... 34 4.2
UniRef50_A7B1M9 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_Q0J8P0 Cluster: Os08g0101500 protein; n=1; Oryza sativa... 33 7.3
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 33 7.3
UniRef50_A1D831 Cluster: RNA-directed RNA polymerase (Sad-1), pu... 33 7.3
UniRef50_A7MPK2 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_A1CZB5 Cluster: Filamentation protein (Rhf1), putative;... 33 9.6
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 174 bits (424), Expect = 2e-42
Identities = 83/113 (73%), Positives = 98/113 (86%), Gaps = 3/113 (2%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
EVRD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATL---LNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++KPGDKVGASEATL LNMLNISPFSYGL+++QVYD+G++++PE+LDI
Sbjct: 157 DVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDI 209
Score = 93.9 bits (223), Expect = 5e-18
Identities = 41/49 (83%), Positives = 47/49 (95%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRG 49
Score = 81.0 bits (191), Expect = 4e-14
Identities = 35/44 (79%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALE+LLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDL 95
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 173 bits (422), Expect = 4e-42
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 4e-19
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-14
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 169 bits (411), Expect = 8e-41
Identities = 79/120 (65%), Positives = 99/120 (82%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTI 601
E ++R+ +L N+V APA+ GAIAP+ V +PA NTGLGPEKTSFFQALSI TKIS+GTI
Sbjct: 93 EDMVDIREIMLSNQVGAPAKAGAIAPVDVFVPASNTGLGPEKTSFFQALSIATKISRGTI 152
Query: 602 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLV 781
EI+++VH++K G+KVGASEATLL ML I PF+YGL + QVYDSG++FAP ILDI DL+
Sbjct: 153 EILSEVHLIKIGEKVGASEATLLQMLKIFPFTYGLKIVQVYDSGSVFAPSILDITEDDLI 212
Score = 77.8 bits (183), Expect = 3e-13
Identities = 40/82 (48%), Positives = 51/82 (62%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSXYRAHGXKHN 323
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG G K+
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMG-KNT 59
Query: 324 DAQSHQRPPGQQSSPRETVATH 389
+ R +Q+ E V H
Sbjct: 60 TIRKALRGHLEQNPNLEKVLPH 81
Score = 70.1 bits (164), Expect = 7e-11
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +1
Query: 301 VLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLV 432
+LMG NT +RKA++ HL+ NP LEK+LPH+KGN+GFVFT D+V
Sbjct: 53 ILMGKNTTIRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMV 96
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 146 bits (354), Expect = 7e-34
Identities = 68/116 (58%), Positives = 89/116 (76%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
EV +++ + KV APAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII
Sbjct: 99 EVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 158
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLV 781
V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F+PE+LD+ LV
Sbjct: 159 PVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLV 214
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/46 (52%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMM+++++ H +N N A+ LLP ++GNVG +FT+GDL
Sbjct: 52 VVLMGKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDL 97
Score = 50.4 bits (115), Expect = 6e-05
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRG 49
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 145 bits (352), Expect = 1e-33
Identities = 68/116 (58%), Positives = 89/116 (76%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
EV +++ + KV APAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII
Sbjct: 100 EVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLV 781
V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F PE+L++ DLV
Sbjct: 160 PVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLV 215
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/46 (52%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMM+++++ H D N A LLP ++GNVG +FT+GDL
Sbjct: 53 VVLMGKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDL 98
Score = 47.2 bits (107), Expect = 6e-04
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +3
Query: 159 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRG 50
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 122 bits (295), Expect = 9e-27
Identities = 58/107 (54%), Positives = 76/107 (71%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
EV+ + +V APA+ G AP V+IPA TG+ P +TSF Q L I TKI++G I+I+N
Sbjct: 96 EVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVN 155
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 754
+VHI+K G KVGASEATLL LNI PF+YGL K +YD+G ++P I
Sbjct: 156 EVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSI 202
Score = 39.1 bits (87), Expect = 0.15
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 301 VLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
VLMG TM+RK I+D D+ P L+ L ++K N +F + ++
Sbjct: 52 VLMGKKTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCKDNI 94
Score = 35.1 bits (77), Expect = 2.4
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 171 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
K + K +L Y K + AD VGS Q+Q+IR S+RG
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRG 48
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 120 bits (289), Expect = 5e-26
Identities = 58/103 (56%), Positives = 77/103 (74%)
Frame = +2
Query: 455 ENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKP 634
+++VQAPAR GAIAP V++PA NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L
Sbjct: 111 KHRVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSV 170
Query: 635 GDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
GD+V S ATLL L+ISPF Y + V+ V+D G +F E L I
Sbjct: 171 GDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSI 213
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 119 bits (286), Expect = 1e-25
Identities = 54/117 (46%), Positives = 82/117 (70%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 610
++++ KL E K +PA+ G IAP V++PA +TGL P +T+F QAL+I +KI+KG IEI
Sbjct: 103 YQLKAKLTELKAPSPAKAGVIAPNDVIVPAGDTGLDPTQTNFVQALNIASKITKGQIEIT 162
Query: 611 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLV 781
++ ++K G+KVG S+A LL L I+PF YG V+ VYD+G ++ + LD+ D+V
Sbjct: 163 SETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDVVYDNGIVYDAKALDLTESDIV 219
Score = 67.7 bits (158), Expect = 4e-10
Identities = 28/42 (66%), Positives = 36/42 (85%)
Frame = +1
Query: 304 LMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+MG NT++RKAIK+ + P LE+LLPHIKGNVGF+FT+GDL
Sbjct: 61 VMGKNTLIRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDL 102
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGS 293
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGT 57
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 117 bits (281), Expect = 5e-25
Identities = 60/147 (40%), Positives = 86/147 (58%)
Frame = +2
Query: 347 TWTTIQPSRNCCHTSRATLASCSPAETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHN 526
TWT I + L +++D + + +APAR G++A V I A
Sbjct: 86 TWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGG 145
Query: 527 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 706
TGL P++T+FFQ L+IPTKI+K IEI D I+ G+KVG++EA LL LNI+PFSY L
Sbjct: 146 TGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINPFSYKL 205
Query: 707 VVKQVYDSGTIFAPEILDIKPXDLVPS 787
V V+D+G ++ P +LDI ++ S
Sbjct: 206 SVAHVFDNGNVYGPGVLDITSESIIES 232
Score = 36.7 bits (81), Expect = 0.78
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGS 293
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR +
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSN 50
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 113 bits (271), Expect = 7e-24
Identities = 55/117 (47%), Positives = 73/117 (62%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 610
F+++ + ENKV+ PAR GA+AP+ VVIP TG+ P FF AL IPTKI KG I+I
Sbjct: 114 FDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTKIEKGQIQIT 173
Query: 611 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLV 781
D +LK G KVG S+A LL L PF YG+ V YD+G+I + + + D+V
Sbjct: 174 KDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACYDNGSILNKQQVSVNLNDIV 230
Score = 41.9 bits (94), Expect = 0.021
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR 275
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q IR
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIR 44
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 113 bits (271), Expect = 7e-24
Identities = 58/117 (49%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Frame = +2
Query: 434 EVRDKLLENKVQA-PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 610
E+R+ +L+NK + PAR G IAP+ V IP TG+ P TSF ++L I TKI KG IEI
Sbjct: 97 EIRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQ 156
Query: 611 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLV 781
VH++K G+KV AS ATLL N++P SYG+ V+ VYD G I+ ++LDI D++
Sbjct: 157 EHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDITDEDIL 212
Score = 50.4 bits (115), Expect = 6e-05
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +1
Query: 301 VLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+LMG NT +R A+K +L P +EKLLP +K N+GFVF + DL
Sbjct: 53 ILMGKNTRIRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDL 95
Score = 44.4 bits (100), Expect = 0.004
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRG 49
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 111 bits (267), Expect = 2e-23
Identities = 59/141 (41%), Positives = 82/141 (58%)
Frame = +2
Query: 341 KTTWTTIQPSRNCCHTSRATLASCSPAETSFEVRDKLLENKVQAPARPGAIAPLSVVIPA 520
K TWT + R + EV + E+KV A A+ G IAP V +
Sbjct: 76 KNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPNDVHVYP 135
Query: 521 HNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSY 700
TG+ P +TSFFQAL I TKI KG I+I+N++H++ KVG SEA LL L + PFS+
Sbjct: 136 GPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFSF 195
Query: 701 GLVVKQVYDSGTIFAPEILDI 763
GL VK VYD+G++++ E+L +
Sbjct: 196 GLKVKNVYDNGSVYSAEVLKL 216
Score = 37.1 bits (82), Expect = 0.59
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +3
Query: 171 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 287
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLR 41
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 106 bits (255), Expect = 6e-22
Identities = 51/118 (43%), Positives = 76/118 (64%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
+++ + EN +A A+ G +A V + + TG+ P+KTS+FQAL I TKI+KG +EII+
Sbjct: 119 DIKKAIDENVREACAKVGNVAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIIS 178
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLVPS 787
+L GDKVG S+A LL MLNI PF Y + + Q+Y+ G I+ ++DI D+ S
Sbjct: 179 PYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVIYDSSLIDIGEEDIFTS 236
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 105 bits (251), Expect = 2e-21
Identities = 52/113 (46%), Positives = 68/113 (60%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 610
F ++ K+ V APAR G +A V+IP TG+ P + +FF ALSI TKI KG IEI
Sbjct: 114 FALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQIEIT 173
Query: 611 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 769
+V + G K+G SE +LL +NI PFSYG+ YD+G I E+L I P
Sbjct: 174 KEVQVCTKGKKIGNSEVSLLEKMNIQPFSYGMKCFSDYDNGEILTEEVLSISP 226
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 156 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISL 284
DK K + + +LL +Y + +NVGS Q+QQIR SL
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSL 49
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 92.7 bits (220), Expect = 1e-17
Identities = 49/115 (42%), Positives = 67/115 (58%)
Frame = +2
Query: 455 ENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKP 634
+ K +A A+ G +AP VVI T GP++ F+ AL I TKI+KG IEI+N V+++K
Sbjct: 105 KTKRKAAAKAGIVAPADVVIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKK 164
Query: 635 GDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLVPSPSWS 799
GD V S ATLL L I PF Y + +YD G I+ +L+I D V W+
Sbjct: 165 GDIVTPSHATLLQRLEIDPFFYAMSALNLYDDGEIYDAAVLEI--DDSVMEAKWN 217
Score = 40.3 bits (90), Expect = 0.063
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +1
Query: 301 VLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGD 426
+L G NT++++ I + LD++ L+ LLP+IK NV FVFT GD
Sbjct: 56 LLAGKNTIIKRVI-NQLDDDK-LKNLLPYIKLNVAFVFTNGD 95
Score = 35.5 bits (78), Expect = 1.8
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 159 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
K + Y K+ + L EY K +V DNV S Q+ QIR LRG
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRG 52
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 92.7 bits (220), Expect = 1e-17
Identities = 45/109 (41%), Positives = 65/109 (59%)
Frame = +2
Query: 437 VRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIND 616
++D + N + + A+ GAIAP V++ T + P AL+I KI KGTIEI +
Sbjct: 100 IKDVIDANCLGSAAKVGAIAPCDVILQPQRTSMSPNDIKILHALNIQCKIFKGTIEITGE 159
Query: 617 VHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
++ G KVGASEA +LN+L I PF Y L ++ +YD G ++ P IL I
Sbjct: 160 KQLIWEGQKVGASEANILNILGIMPFKYTLKIEALYDHGNMYDPSILAI 208
Score = 35.1 bits (77), Expect = 2.4
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 301 VLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGD 426
VL G N++MR+A+ + P + +L H+ G +FT G+
Sbjct: 55 VLFGKNSLMRRAVDQLKEELPGIRQLEEHLYHGAGLIFTNGN 96
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 91.1 bits (216), Expect = 3e-17
Identities = 44/116 (37%), Positives = 71/116 (61%)
Frame = -3
Query: 763 DVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLVTGLQDVYIVDDFNSTL*N 584
D+Q+ ++ + ++ L + +T+ EWR+VQ V++ FRS++ +T + D+ + D+FN T N
Sbjct: 121 DIQDGSWEDLTVVVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGN 180
Query: 583 LGRDRKSLEERGLLWTEAGVVGGNDD*QWGNGTRTSWSLDFVLQQFVTDLKRGLRG 416
LG + +SLEER L W GV G N D WGN T + WS + V D+ +G+ G
Sbjct: 181 LGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQGIVG 236
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 88.2 bits (209), Expect = 2e-16
Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEI 607
F++ L +N+ APA+PGA+ P VV+PA T L P QAL IP +I KG + I
Sbjct: 97 FKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTI 156
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLV 781
D +LK G+ + A +LN L I P GL V VY+ G ++ P++L I + +
Sbjct: 157 QKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYI 214
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 81.8 bits (193), Expect = 2e-14
Identities = 41/113 (36%), Positives = 64/113 (56%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTI 601
E F +++ L N + A+ G +A V + T + P+ FQ+L+IPTKI KG I
Sbjct: 92 EDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTNISPDGIGIFQSLNIPTKILKGQI 151
Query: 602 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 760
EII + +L+ G K+ +EATLL LNI PF + + Y++G + P +L+
Sbjct: 152 EIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKIISFYENGKSYDPSVLN 204
Score = 43.2 bits (97), Expect = 0.009
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGD 426
I++ G NT+++K ++D L N+ ++L I GNV F+FT D
Sbjct: 51 ILITGKNTLIKKVLRDRLKNSTLSNEILTKINGNVSFIFTNED 93
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 76.6 bits (180), Expect = 8e-13
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEI 607
FE+ L + K+ AR G IA +V+PA NTG+ P S F L IPT++ +G+I I
Sbjct: 101 FEILFFLDKQKIMREARAGDIATSEIVLPAGNTGIPPGPMISNFNKLGIPTRVQEGSIWI 160
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
D + KPGD + A LL+ L + P L +K +Y G + +P+ +++
Sbjct: 161 AKDTVVAKPGDVISPELAELLSKLGLKPIESKLQIKTIYLDGKVVSPKDVEL 212
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIE 604
F + L +NK AR G IA + V +PA NTG+ GP T F +A IPTKI +GTI
Sbjct: 82 FTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIW 140
Query: 605 IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
I+ D +K G+ +G A LL L+I P + ++ + G I++ E L +
Sbjct: 141 ILKDTTPVKKGEPIGDKLAPLLGKLDIKPVEAVIALESALEEGVIYSREDLAV 193
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +2
Query: 446 KLLEN-KVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDV 619
K+LE+ K +APA+ G+IAP +V+PA +T P Q + IP KI KG+I + +D
Sbjct: 96 KILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDA 155
Query: 620 HILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLV 781
I+ G+++ + A +L L I P G+ + V + TI+ ++L I + +
Sbjct: 156 KIVDEGEEIPKAVADILTKLEIHPMEVGIDLLAVCEGDTIYTADVLAIDEEETI 209
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGT 598
E F++ +++N V+ A+PG + +++PA NTG+ P S F L IPT+I G
Sbjct: 104 ENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGINPGPVLSRFSKLKIPTQIRDGK 163
Query: 599 IEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQV 721
I + D + KPGD V A LL ++N+ P L VK V
Sbjct: 164 IWVARDTQVAKPGDTVTPELADLLRLINVKPVYESLKVKAV 204
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/82 (40%), Positives = 50/82 (60%)
Frame = +2
Query: 485 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEAT 664
G IA +++I L P +T FFQAL IPT+ISK +IEII D+ ++ + S+
Sbjct: 109 GEIAQRNIIIKKGIKNLSPSQTPFFQALGIPTRISKSSIEIIEDILLVSKNQALNKSQEV 168
Query: 665 LLNMLNISPFSYGLVVKQVYDS 730
LL L+I P YG+ +K+++ S
Sbjct: 169 LLKKLDIKPHKYGVKIKKIFSS 190
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 71.7 bits (168), Expect = 2e-11
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEI 607
F++ L E+K AP + GAIAP + + + +TG+ P S +A+ IP I KG I I
Sbjct: 102 FKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGI 161
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
D + K GD + A +L+ L I P + GL V VY+ G I+ ++L I
Sbjct: 162 KEDKVVAKEGDVISPKLAVVLSALGIKPVTVGLNVLGVYEEGVIYTSDVLRI 213
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 70.1 bits (164), Expect = 7e-11
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIE 604
F++ L +NK+ AR G IA + VV+PA NTG+ GP T F +A IPTKI +GTI
Sbjct: 96 FKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIW 154
Query: 605 IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPE--ILDIK 766
I D + G+ + A +L L+I P G+ + + G +A E I+D++
Sbjct: 155 IAKDSTPVLKGEAINEKLAAILGKLDIKPVEAGITLFTALEDGLKYAEEEMIIDVE 210
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 69.7 bits (163), Expect = 9e-11
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGT 598
+ F++ K+ + + APA+PG +A +V+PA +TGL P S F L I T + GT
Sbjct: 102 DNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGT 161
Query: 599 IEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 724
I I D + KPGD + A+LL L I+P + +K Y
Sbjct: 162 IHIAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAY 203
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 68.1 bits (159), Expect = 3e-10
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = +2
Query: 428 SFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIE 604
+FE+ L + K + +PG IA +VIP NTGL P S F L IPT+I +I
Sbjct: 98 AFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRIQGNSIV 157
Query: 605 IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPE--ILDIK 766
I D + KPGD + A+LL L+I+ + +K YD G I + +LD++
Sbjct: 158 ITRDTVVAKPGDTISEELASLLQRLDIALKEVKINIKAAYDHGIIILRDQLVLDLE 213
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 67.3 bits (157), Expect = 5e-10
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGT 598
+ F + +L +K AP G +AP +V+P +TG+ P Q + +I +G+
Sbjct: 96 DNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGS 155
Query: 599 IEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
I++++D + + G+ V + +L+ L I P GL ++ V+ G +F PE L+I
Sbjct: 156 IQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVLFTPEELEI 210
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 66.1 bits (154), Expect = 1e-09
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGT 598
E+ F++ L + K +P + GAIAP +++ T P Q+ IP I G
Sbjct: 95 ESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASIDAGK 154
Query: 599 IEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
+ + + K G+ V AT+L+ L I P GL ++ YD GTI+ PE+L +
Sbjct: 155 VAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAV 209
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEI 607
F++ L E+K APA+PG IAP +V+P T P S Q +P +I G + I
Sbjct: 108 FKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVI 167
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
D ++K G+++ A +L L I P G+ + + GT+F + L I
Sbjct: 168 TKDTVLVKEGEEIDEKTAEILKKLEIEPMEVGVDIVAIVAEGTLFERDDLAI 219
Score = 46.4 bits (105), Expect = 0.001
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGD 426
I+ M NT+MR A+++ LD P LE LL +I+G V F+FT D
Sbjct: 64 IIRMSRNTLMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLD 106
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 147 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 287
G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLR 59
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 64.5 bits (150), Expect = 3e-09
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Frame = +2
Query: 413 SPAETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKI 586
S E F++ +E+KV P + G IAP +VIP T + GP +T +AL + TK+
Sbjct: 85 STNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTKV 143
Query: 587 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIK 766
+ G IEI+ D ++K G+ V A +L L I P + + D + +IL+
Sbjct: 144 TSGKIEIVEDAVVVKEGEIVSPKVANVLQTLGIKPIERQVTLIAAKDE-VFYDKQILN-T 201
Query: 767 PXDL 778
P DL
Sbjct: 202 PLDL 205
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 62.5 bits (145), Expect = 1e-08
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Frame = +2
Query: 401 LASCSPAETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIP 577
+A + E F + + + KV +P +P ++P+ VV+ T + P + Q +P
Sbjct: 85 IAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPPGPLMAELQMAGLP 144
Query: 578 TKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEIL 757
I KG + + ++K G+ V A L L+I P GL VK + DSG I PE L
Sbjct: 145 VAIEKGKVVVKATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVILTPETL 204
Query: 758 DI 763
I
Sbjct: 205 AI 206
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 62.1 bits (144), Expect = 2e-08
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Frame = +2
Query: 437 VRDKLLEN-KVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEI 607
+ + EN K++ A PG A VVIPA +TG+ GP S F L + TK+ G + +
Sbjct: 101 ITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAGPI-LSVFGKLKVQTKVQDGKVHV 159
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
+ D + KPGD + A +L L I P L +K Y G + E L +
Sbjct: 160 VKDTVVAKPGDVIPAEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAESLKL 211
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 60.9 bits (141), Expect = 4e-08
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGT 598
E F++ L + K + A+PG AP +VIP T P Q + IP I G
Sbjct: 92 ENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQQVGIPAAIEGGK 151
Query: 599 IEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
++I ++K G+ + A L L + P GL+++ Y TIF P++L I
Sbjct: 152 VKIRETKTVVKKGEVINKKVAEALVKLGVKPMDVGLILQAAYYRETIFTPDLLAI 206
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 56.8 bits (131), Expect(2) = 9e-08
Identities = 39/72 (54%), Positives = 44/72 (61%)
Frame = +2
Query: 563 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF 742
ALSIP KISKGTIEIINDV ILK GDK ++QVY G+IF
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDK----------------------IEQVY--GSIF 773
Query: 743 APEILDIKPXDL 778
+P+ILDIKP DL
Sbjct: 774 SPDILDIKPEDL 785
Score = 50.4 bits (115), Expect = 6e-05
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1
Query: 328 RKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLV 432
++AI+ HL+ N L KLLPHIK VGFVFT+GDLV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLV 726
Score = 22.6 bits (46), Expect(2) = 9e-08
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +2
Query: 434 EVRDKLLENKV 466
EVRDKL+E+KV
Sbjct: 727 EVRDKLMESKV 737
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 56.0 bits (129), Expect = 1e-06
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEI 607
F++ ++ + KV P +PG A + IP T L P S F L I ++ G I I
Sbjct: 103 FKIVKEVEKEKVAMPVKPGDKAETEIRIPEGMTNLTPGPILSVFGKLRIQYQVRGGKIYI 162
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEIL 757
+ + KPGD + A LL L I P G+ VK D G + ++L
Sbjct: 163 AKETVVAKPGDVISEDLAGLLMALGIRPIEKGVRVKFAIDGGVLITEDLL 212
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 55.6 bits (128), Expect = 2e-06
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Frame = +2
Query: 446 KLLEN-KVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDV 619
K+LE K+ AP + GA+AP+ +VI T L P Q L IP+ I G + +
Sbjct: 97 KVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGPVVGELQNLGIPSGIDGGKVVVKQRK 156
Query: 620 HILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSG--TIFAPEILDI 763
++ G+ V A +L L I P + GL + VYDSG +F+ ++L +
Sbjct: 157 VAVEEGEIVSPELADMLAKLEIYPITEGLDLCAVYDSGESVLFSSDVLHV 206
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEII 610
EV + EN V+ A+PG AP +V+PA T P S F L IPT++ +G I I
Sbjct: 105 EVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGKLKIPTRVQEGKIWIA 164
Query: 611 NDVHILKPGDKVGASEATLLNMLNISP 691
D + K G ++ A +L ++ I P
Sbjct: 165 KDTVVAKAGQEITPEMAEVLRVVGIEP 191
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 53.2 bits (122), Expect = 8e-06
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGT 598
+ F++ L K + A+ G IAP +VIP T P FQ + IP I G
Sbjct: 99 DNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPTSFKPGPLVGEFQQVGIPAGIEGGK 158
Query: 599 IEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEIL 757
+ I + ++K G+K+ A A L L I P GL + + ++ PE L
Sbjct: 159 VVIKDTKTVVKQGEKISAKLAEALTRLEIMPIDVGLNLMAAVEGHMLYKPEDL 211
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 52.8 bits (121), Expect = 1e-05
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEI 607
F ++ L K P + GA+AP+ +V+ + T P Q+ IP I G + I
Sbjct: 98 FALKKMLDAEKRPMPIKAGAVAPVDIVVESGETSFSPGPMVGKLQSAGIPAAIKGGKVVI 157
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
V + K GD + A +L ++ I P GL ++ Y +F E L +
Sbjct: 158 NQRVVLAKQGDVITPKVAEVLKLMEIYPKLVGLELRAAYSDRLVFTAEDLAV 209
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 49.6 bits (113), Expect = 1e-04
Identities = 26/47 (55%), Positives = 29/47 (61%)
Frame = -1
Query: 600 IVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTL 460
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATL 47
Score = 44.4 bits (100), Expect = 0.004
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 416 VNTKPTLPLMCGNSFSRAGLLSRWSLMALRIIVFXPMST 300
V TKPTLPL GN+FS++G + LMAL +VF P+ T
Sbjct: 62 VKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKT 100
>UniRef50_Q2H8Y4 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 797
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 255 QQMQQIRISLRGSXYRAHGXKHNDAQSHQRPPGQQSSPRETVATHQG 395
Q+MQQ + + AH +H + H +PP Q +P++ HQG
Sbjct: 517 QEMQQNLAHAQHAHQHAHQHQHPHSHQHHQPPAQMGTPQQIQPGHQG 563
>UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04875.1 - Gibberella zeae PH-1
Length = 506
Score = 34.7 bits (76), Expect = 3.2
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -1
Query: 747 GAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSLMISIVPFEI-LVGI 571
G ++ +Y LT YE GE +N SEA LSP +++ + + +I +
Sbjct: 178 GTLMLLNNYITLTAEAYEKGETYNPPPLDGSEASNLSPSYRIAARIPDKLPQAQIDRLNA 237
Query: 570 ERAWKKEVFSGPRPVLWAGMTTDNGAMAPGR 478
A K V S P + A + G + PGR
Sbjct: 238 MAAQKAAVASDPSIQVLA-LPFRKGEIVPGR 267
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 34.7 bits (76), Expect = 3.2
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 535
EV ++ + KV APAR G ++ + V++P NTGL
Sbjct: 637 EVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 34.3 bits (75), Expect = 4.2
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 535
EV +++ + KV APAR G +A + V++P NT L
Sbjct: 40 EVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_A7T9I2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 115
Score = 34.3 bits (75), Expect = 4.2
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 319 TMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
T++RK +K HLDN P L K LP + G + + + GDL
Sbjct: 71 TIVRKELKSHLDNLPDLSK-LPDVDGGLAPLPSAGDL 106
>UniRef50_A7S712 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 367
Score = 34.3 bits (75), Expect = 4.2
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 319 TMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
T++RK +K HLDN P L K LP + G + + + GDL
Sbjct: 323 TIVRKELKSHLDNLPDLSK-LPDVDGGLAPLPSAGDL 358
>UniRef50_A7B1M9 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 285
Score = 33.9 bits (74), Expect = 5.5
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 183 FVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG--SXYRAHGXKHNDAQSHQRPPG 353
F+K+ Q +D + V N G M ++ I+ RG S +R HG + + SH PG
Sbjct: 39 FLKVSQKIDSFMASLGVNVGNTGGNMMAELLIAGRGLASSFRGHGG-GSHSSSHSSSPG 96
>UniRef50_Q0J8P0 Cluster: Os08g0101500 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os08g0101500 protein -
Oryza sativa subsp. japonica (Rice)
Length = 477
Score = 33.5 bits (73), Expect = 7.3
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +3
Query: 300 RAHGXKHNDAQSHQRPPGQQSSPRETVATHQGQRWLRVHPRRPRLRSVTNCWRTKSKLQL 479
R H H Q H RPP ++ R H+ +R PRRP LR + R +L
Sbjct: 75 RHHPRLHRHLQRHHRPPLRRPHARPAHEVHRRRR-----PRRPLLRHPGDHGRRHPHRRL 129
Query: 480 VLVPLPH 500
+P PH
Sbjct: 130 RPLPRPH 136
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 33.5 bits (73), Expect = 7.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 535
E +++ + KV APA G +A + V++P NTGL
Sbjct: 81 EADEEVAKYKVGAPAHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A1D831 Cluster: RNA-directed RNA polymerase (Sad-1),
putative; n=6; Trichocomaceae|Rep: RNA-directed RNA
polymerase (Sad-1), putative - Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 1599
Score = 33.5 bits (73), Expect = 7.3
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 380 CH-TSRATLASCSPAETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 538
CH T TL+ + S + K E ++Q+P RP I P V +P + G+G
Sbjct: 303 CHGTYPITLSDGKTSFVSISLDPKRPEVQIQSPVRPNTIYPAEVKLPIASMGIG 356
>UniRef50_A7MPK2 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 771
Score = 33.1 bits (72), Expect = 9.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 366 PRETVATHQGQRWLRVHPRRPRLRSVTNCWRTKSKLQLVL 485
P + + + RW+RV + RL N W+T S LQL+L
Sbjct: 250 PWDRLTAYNRMRWVRVVEQLVRLNPAYNNWQTGSALQLIL 289
>UniRef50_A1CZB5 Cluster: Filamentation protein (Rhf1), putative; n=6;
Trichocomaceae|Rep: Filamentation protein (Rhf1),
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 1201
Score = 33.1 bits (72), Expect = 9.6
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -1
Query: 525 LWAGMTTDNGAMAPGRA---GAWTLFSNSLSRTSNEVSAGEHEANVALDVWQQ 376
LWA + T+ G +A ++ A LF +L R + + A AN+ LD+W++
Sbjct: 1008 LWADLHTEQGLLAQAQSRPHDAMELFEEALVRDPDHLKATVCLANLLLDIWER 1060
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 882,925,874
Number of Sequences: 1657284
Number of extensions: 19027354
Number of successful extensions: 54820
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 52107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54785
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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