Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H17
(882 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 151 5e-37
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 151 5e-37
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 151 5e-37
06_01_0080 + 644021-645463 33 0.40
08_02_1369 - 26445725-26445812,26446443-26446529,26446720-264469... 31 0.93
11_01_0472 + 3656471-3656780,3656902-3656996 30 2.1
06_01_0351 + 2537022-2538281 29 3.7
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542... 29 3.7
03_03_0258 - 15905847-15905990,15906088-15906244,15906374-159065... 29 4.9
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281... 29 6.5
03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791... 29 6.5
06_01_0350 + 2534422-2535615 28 8.6
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 151 bits (367), Expect = 5e-37
Identities = 69/116 (59%), Positives = 91/116 (78%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
EVR+++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI+KGT+EII
Sbjct: 100 EVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLV 781
V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+ DL+
Sbjct: 160 PVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLM 215
Score = 52.4 bits (120), Expect = 5e-07
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 429
IVLMG NT++R+ IK H DN N +L+P + GNVG +FT+GDL
Sbjct: 53 IVLMGKNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDL 98
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +3
Query: 150 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRG 50
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 151 bits (367), Expect = 5e-37
Identities = 69/116 (59%), Positives = 91/116 (78%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
EVR+++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI+KGT+EII
Sbjct: 100 EVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLV 781
V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+ DL+
Sbjct: 160 PVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLM 215
Score = 52.4 bits (120), Expect = 5e-07
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 429
IVLMG NT++R+ IK H DN N +L+P + GNVG +FT+GDL
Sbjct: 53 IVLMGKNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDL 98
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +3
Query: 150 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRG 50
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 151 bits (367), Expect = 5e-37
Identities = 69/116 (59%), Positives = 91/116 (78%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
EVR+++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ L+IPTKI+KGT+EII
Sbjct: 100 EVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDLV 781
V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+ DL+
Sbjct: 160 PVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLM 215
Score = 52.8 bits (121), Expect = 4e-07
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 429
IVLMG NT++R+ IK H DN N +L+P + GNVG +FT+GDL
Sbjct: 53 IVLMGKNTLIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDL 98
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +3
Query: 150 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRG 50
>06_01_0080 + 644021-645463
Length = 480
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 616 IVDDFNSTL*NLGRDRKSLEERGLLWTEAGVVGGND 509
I+D N N R K++EERGLL+ GV GG +
Sbjct: 100 IIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEE 135
>08_02_1369 -
26445725-26445812,26446443-26446529,26446720-26446928,
26447501-26447583,26447672-26447720,26447800-26447959,
26448795-26448891,26449424-26449535,26449637-26449702,
26450135-26450206,26450413-26450487,26451139-26451266,
26451551-26451772,26452084-26452355,26452447-26452543,
26452633-26452738,26454834-26455220
Length = 769
Score = 31.5 bits (68), Expect = 0.93
Identities = 23/66 (34%), Positives = 26/66 (39%)
Frame = -1
Query: 435 SNEVSAGEHEANVALDVWQQFLEGWIVVQVVFDGFAHHCVXSHEHDXWSHVARYGSAASV 256
S S G H A + W FLEGW V F+G A H V Y S+A
Sbjct: 340 SQTCSNGGH-AGRNCERWSPFLEGWNSPAVQFEGPAVHVVKQSYLSWCPTSCAYTSSAPS 398
Query: 255 ASPRYR 238
A P R
Sbjct: 399 AQPHDR 404
>11_01_0472 + 3656471-3656780,3656902-3656996
Length = 134
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 333 SHQRPPGQQSSPRETVATHQGQRWLRVHPRRPRLRSVTNCWRTKSKLQLVLVPL 494
SH+ P S + T R L H RRP L+++ C KS + ++ PL
Sbjct: 24 SHRIDPPPSPSSLRRLLTSPPHRLLSSHGRRPTLQTLPRCRPRKSPPRALIPPL 77
>06_01_0351 + 2537022-2538281
Length = 419
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 414 HPRRPRLRSVTNCWRTKSKLQLVLVPLP 497
H R RLR+V WR+ ++++L L+P P
Sbjct: 62 HADRVRLRAVCRPWRSSARVELDLLPPP 89
>01_01_0703 -
5425713-5425862,5426302-5426451,5426853-5426964,
5427120-5427481,5427578-5427712,5427812-5427889,
5427989-5428174,5428266-5428452,5428552-5428658,
5428732-5428806,5428885-5429040,5429165-5429437,
5429548-5429643,5429724-5429814,5429883-5430385
Length = 886
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +2
Query: 602 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 754
E++ +++P D VG S +++ +++ P+S VV+ +Y+S + A +I
Sbjct: 346 EMLPSGFLIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKI 395
>03_03_0258 -
15905847-15905990,15906088-15906244,15906374-15906504,
15906991-15907126,15907193-15907464,15907874-15908169,
15908279-15908646,15908922-15908987,15909064-15909129,
15909226-15909297,15909391-15909459,15909549-15909620,
15909708-15909776,15909874-15909945,15910046-15910178,
15911223-15911361
Length = 753
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 732 PESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 610
PE LT RP +G+ FN LR ++ +PT G + S+
Sbjct: 358 PEKNEPLTLRPIASGK-FNQLRTISIISPTAKEGLQKTVSM 397
>10_01_0266 +
2816391-2818898,2818934-2819162,2819369-2819444,
2819776-2819830,2822042-2822110,2823077-2823321,
2824029-2824065
Length = 1072
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 75 PHGSRAF---CLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPK 221
PH S A CL L+F T R R K T K + II++L+ YP+
Sbjct: 802 PHASSADIDKCLFLEFLMLMTCTTIRNSRSFKFTHKKFGYWMIIEMLNSYPR 853
>03_05_0968 +
29277122-29277445,29278389-29278505,29278957-29279114,
29279678-29279727,29279968-29280161,29280867-29281049,
29281152-29281270,29281383-29281522,29281857-29281937,
29282286-29282389
Length = 489
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 417 GEHEANVALDVWQQFLEGWIVVQVVFDGFAHH 322
G HEA+ L W+ + GW + F GFA H
Sbjct: 189 GNHEASNYL--WELYYGGWAAPNIYFLGFAGH 218
>06_01_0350 + 2534422-2535615
Length = 397
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 414 HPRRPRLRSVTNCWRTKSKLQLVLVPLP 497
H R RLR+V WR+ ++L+ L+P P
Sbjct: 30 HGDRVRLRAVCRPWRSSARLERKLLPPP 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,361,383
Number of Sequences: 37544
Number of extensions: 549565
Number of successful extensions: 1535
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1532
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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