Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H17
(882 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 173 5e-43
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 173 5e-43
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 173 5e-43
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 173 5e-43
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 173 5e-43
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 173 5e-43
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 173 5e-43
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 173 5e-43
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 173 5e-43
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 173 5e-43
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 173 5e-43
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 173 5e-43
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 173 5e-43
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 173 5e-43
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 173 5e-43
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 172 2e-42
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 170 5e-42
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 97 6e-20
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 97 6e-20
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 80 1e-14
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 7.3
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 7.3
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 7.3
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 7.3
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 7.3
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 7.3
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGRNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 173 bits (422), Expect = 5e-43
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 172 bits (418), Expect = 2e-42
Identities = 80/109 (73%), Positives = 95/109 (87%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 760
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LD
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLD 205
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 80.2 bits (189), Expect = 9e-15
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDL 95
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 170 bits (414), Expect = 5e-42
Identities = 80/110 (72%), Positives = 95/110 (86%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 92.3 bits (219), Expect = 2e-18
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 610
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 82.2 bits (194), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 97.5 bits (232), Expect = 6e-20
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = +3
Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRG 49
Score = 92.3 bits (219), Expect = 2e-18
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 610
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 96 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
Score = 73.7 bits (173), Expect = 8e-13
Identities = 34/44 (77%), Positives = 40/44 (90%)
Frame = +1
Query: 298 IVLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+VLMG NTMMRKAI+ HL+NNPALEKLLP ++GNVGFVFT+ DL
Sbjct: 52 VVLMGKNTMMRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDL 94
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/45 (77%), Positives = 43/45 (95%)
Frame = +2
Query: 629 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 46
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 729 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 610
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 729 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 610
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 276 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 729 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 610
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 729 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 610
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 729 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 610
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 729 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 610
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,340,297
Number of Sequences: 237096
Number of extensions: 3136344
Number of successful extensions: 10623
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 10286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10621
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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