Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H17
         (882 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   175   3e-44
AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical ...    29   4.4  
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  175 bits (426), Expect = 3e-44
 Identities = 78/115 (67%), Positives = 97/115 (84%)
 Frame = +2

Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
           E+R KLLEN+  APA+ GAIAP  V +P  NTG+GPEKTSFFQAL IPTKI++GTIEI+N
Sbjct: 97  EIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILN 156

Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPXDL 778
           DVH++K GDKVGASE+ LLNML ++PFSYGLVV+QVYD GT++ PE+LD+   +L
Sbjct: 157 DVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEEL 211



 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 31/49 (63%), Positives = 43/49 (87%)
 Frame = +3

Query: 144 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG 290
           M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RG
Sbjct: 1   MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRG 49



 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +1

Query: 301 VLMGXNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
           +LMG NTM+RKA++ HL  NP+LEKLLPHI  NVGFVFT+ DL
Sbjct: 53  ILMGKNTMIRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDL 95


>AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical
           protein Y67D8B.2 protein.
          Length = 327

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = +2

Query: 401 LASCSPAETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPT 580
           L++CSP     +    +L   +Q  A   A+  L+  +P   TGL P +   FQAL  P 
Sbjct: 28  LSNCSPY--FLQDFTHVLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPR 83

Query: 581 KISKGT 598
            I+  T
Sbjct: 84  SIAPRT 89


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +3

Query: 99  LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDE 212
           L+ K   S ++ +SR+ +EDK +  SN+++K  QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,710,857
Number of Sequences: 27780
Number of extensions: 431648
Number of successful extensions: 1284
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)