Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H15
(1342 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 36 0.097
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.52
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.91
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.91
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 32 1.2
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.2
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 31 1.6
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 31 1.6
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 31 1.6
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 31 2.1
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 31 2.1
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 2.8
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 31 2.8
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 30 3.7
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 30 4.8
SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 29 8.5
SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 29 8.5
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 35.5 bits (78), Expect = 0.097
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -3
Query: 146 GXLXVXPPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
G PP PPPG P PP GG P PPPP
Sbjct: 299 GSAPAPPPPPPPGGAPPPPPPPPPP---PPGDGGAPPPPPPP 337
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.1 bits (72), Expect = 0.52
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPPXXR 12
PP PPP P P PP P PPPP R
Sbjct: 397 PPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALR 435
Score = 32.7 bits (71), Expect = 0.69
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P P PP + P PPPP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPP 402
Score = 32.7 bits (71), Expect = 0.69
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P P PP P PPPP
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 32.7 bits (71), Expect = 0.69
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P P PP P PPPP
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P P PP P PPPP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPP 401
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P P PP P PPPP
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPP 403
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P P PP P PPPP
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPP 413
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P P PP P PPPP
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNPTHXXQXARXXPKXXXXP 458
P P P PP PP P PPP P A P P
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P P PP P PPPP
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P P PP P PPPP
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNP 407
P P P+ PP PP P PPP P
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPP 410
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNP 407
P P P PP PP P PPP P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQP 395
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 354 PKTPPXPPXPXPPPXXNPTHXXQXARXXPKXXXXP 458
P PP PP P PPP +P Q P P
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPP 406
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNP 407
P P P PP PP P PPP P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPP 397
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNP 407
P P P PP PP P PPP P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPP 406
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNP 407
P P P PP PP P PPP P
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPP 409
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNP 407
P P P PP PP P PPP P
Sbjct: 405 PPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 258 PXXPXXPRXXXXXXXXXXGXXXXPXGPHXXNXPKTPPXPPXPXPPP 395
P P P P P P PP PP P PPP
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P P PP P PPPP
Sbjct: 371 PPPPPPSPPPPPPPP--PPSPPPPPQPPPPPPPPPP 404
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PP P P PP P PPPP
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPP 407
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +3
Query: 354 PKTPPXPPXPXPPPXXNPTHXXQXARXXPKXXXXP 458
P PP PP P PPP P + P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPP 403
Score = 29.1 bits (62), Expect = 8.5
Identities = 17/68 (25%), Positives = 19/68 (27%)
Frame = +3
Query: 240 PXXXXXPXXPXXPRXXXXXXXXXXGXXXXPXGPHXXNXPKTPPXPPXPXPPPXXNPTHXX 419
P P P P P P P PP P P PPP P
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPAL 434
Query: 420 QXARXXPK 443
+ A P+
Sbjct: 435 RLACAPPR 442
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P PP P PPPP
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPP 410
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -3
Query: 125 PXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
P PPP P P PP P PPPP
Sbjct: 389 PPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.3 bits (70), Expect = 0.91
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P G P G P PPPP
Sbjct: 953 PPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPP 988
Score = 32.3 bits (70), Expect = 0.91
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPPG PP P PPPP
Sbjct: 954 PPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPP 989
Score = 31.1 bits (67), Expect = 2.1
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = -3
Query: 134 VXPPXPPPGX--PXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
V PP PPPG P P G GG PPPP
Sbjct: 919 VPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPP 958
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.3 bits (70), Expect = 0.91
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 128 PPXPPP--GXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP G P P GPP G P PPPP
Sbjct: 375 PPPPPPTNGPPPPPPPTNGPPPPPPPTNG--PPPPPPP 410
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPP 24
PP PPP P P PP GG P PPP
Sbjct: 676 PPPPPPPLPGGAAPPPPPPIG-----GGAPPPPPP 705
Score = 31.5 bits (68), Expect = 1.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPPG P PP GG PPPP
Sbjct: 663 PPPPPPGGQAGGAPPPPPP----PLPGGAAPPPPPP 694
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPP 24
PP PPP P PP G P PPP
Sbjct: 660 PPPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPP 694
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 529 PTXXXNTXPPRGXPPXXXPKXTGPXNXPPXHPEXP 633
P +T PP+ PP P+ GP PP P P
Sbjct: 428 PPPPQHTGPPQPRPPHGMPQGGGPPQLPPNLPPPP 462
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -3
Query: 140 LXVXPPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
L PP PPP P TP PP G P PPPP
Sbjct: 774 LGAPPPPPPPTKPA--TPRV-PPNIPSRPPGARPTPPPPP 810
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 31.5 bits (68), Expect = 1.6
Identities = 24/106 (22%), Positives = 29/106 (27%), Gaps = 1/106 (0%)
Frame = +2
Query: 824 PPXXGXRPXRXXXPGRRXXSPTXXTPRXGXRXPXPTHA-XAXNTGXXGKXXXADHKPXTQ 1000
PP RP PG P P G P P +A G P +
Sbjct: 232 PPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSN 291
Query: 1001 TQXXEQXPXXRPRXGAXRRGXQRGXRXPRPPGXTHRXXXPXPPXPG 1138
+ + P R A P PP + P PP G
Sbjct: 292 SFTTQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRG 337
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 31.5 bits (68), Expect = 1.6
Identities = 24/106 (22%), Positives = 29/106 (27%), Gaps = 1/106 (0%)
Frame = +2
Query: 824 PPXXGXRPXRXXXPGRRXXSPTXXTPRXGXRXPXPTHA-XAXNTGXXGKXXXADHKPXTQ 1000
PP RP PG P P G P P +A G P +
Sbjct: 144 PPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSN 203
Query: 1001 TQXXEQXPXXRPRXGAXRRGXQRGXRXPRPPGXTHRXXXPXPPXPG 1138
+ + P R A P PP + P PP G
Sbjct: 204 SFTTQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRG 249
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNPT 410
P P + P PP PP P PPP T
Sbjct: 1162 PPPPPPPSSPSPPPPPPPPPPPPTPTTT 1189
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNPT 410
P P P + P PP P PPP PT
Sbjct: 1158 PPPPPPPPPPPSSPSPPPPPPPPPPPPT 1185
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 327 PXGPHXXNXPKTP-PXPPXPXPPPXXNPT 410
P P P +P P PP P PPP PT
Sbjct: 1159 PPPPPPPPPPSSPSPPPPPPPPPPPPTPT 1187
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGG-XPXXPPP 24
P PPPG P P G P+ G P PPP
Sbjct: 589 PRVPPPGAPHPKVPPPGAPYQRLPYSGAYHPRLPPP 624
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGG-XPXXPPP 24
P PPPG P P G P G P PPP
Sbjct: 439 PRFPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPP 474
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGG-XPXXPPP 24
P PPPG P P G P G P PPP
Sbjct: 449 PRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPP 484
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGG-XPXXPPP 24
P PPPG P P G P G P PPP
Sbjct: 459 PRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPP 494
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
P PPPG P P G P G PPP
Sbjct: 469 PRVPPPGAPHPRVPPPGAPHPRVPPPGAPHQRVPPP 504
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGG-XPXXPPP 24
P PPPG P P G P G P PPP
Sbjct: 479 PRVPPPGAPHPRVPPPGAPHQRVPPPGAPHPRVPPP 514
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGG-XPXXPPP 24
P PPPG P P G P G P PPP
Sbjct: 489 PRVPPPGAPHQRVPPPGAPHPRVPPPGAPHPRVPPP 524
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGG-XPXXPPP 24
P PPPG P P G P G P PPP
Sbjct: 509 PRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPP 544
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGG-XPXXPPP 24
P PPPG P P G P G P PPP
Sbjct: 519 PRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPP 554
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXG-GXPXXPPP 24
P PPPG P P G P G P PPP
Sbjct: 529 PRVPPPGAPHPRVPPPGAPHPRVPPPGASHPRVPPP 564
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGG-XPXXPPP 24
P PPPG P P G P G P PPP
Sbjct: 569 PRVPPPGAPHPRVPPPGTPHPRVPPPGAPHPKVPPP 604
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGG-XPXXPPP 24
P PPPG P P G P G P PPP
Sbjct: 429 PRVPPPGAPHPRFPPPGAPHPRVPPPGAPHPRVPPP 464
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXG-GXPXXPPP 24
P PPPG P P G P G P PPP
Sbjct: 559 PRVPPPGAPHPRVPPPGAPHPRVPPPGTPHPRVPPP 594
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Frame = -3
Query: 212 RXPXXXPXXXPXXGXXXNFXWXGXLXVXPPXPPPGXPXXXTPXXGPPFXT---XXXXGGX 42
R P P P G PP PPP P P P GG
Sbjct: 136 RAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGP 195
Query: 41 PXXPPPP 21
P PPPP
Sbjct: 196 PPPPPPP 202
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 312 GXXXXPXGPHXXNXPKTPPXPPXPXPPPXXNP 407
G P P P PP PP P PPP P
Sbjct: 459 GVGQAPPPPPPPPPPPPPPPPPPPPPPPPFPP 490
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNP 407
P P P PP PP P PPP P
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPFPPP 491
Score = 29.5 bits (63), Expect = 6.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNPTH 413
P P P PP PP PPP P H
Sbjct: 470 PPPPPPPPPPPPPPPPPPFPPPPPPTPLH 498
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/103 (21%), Positives = 23/103 (22%)
Frame = +3
Query: 354 PKTPPXPPXPXPPPXXNPTHXXQXARXXPKXXXXPQXNXXXXXXTRXXPXPGGXXRXXPN 533
P PP P P PPP P P P N P P
Sbjct: 92 PPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPP 151
Query: 534 XTXXHPPXXXKXPXXXXXXXRXXQXAPXPPXXTXXXPXXTXRP 662
+PP P P PP P P
Sbjct: 152 PNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPP 194
Score = 30.3 bits (65), Expect = 3.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNPTH 413
P P+ N P PP PP P PP NP +
Sbjct: 196 PPPPNAPNPP--PPNPPYPPPPNAPNPPY 222
Score = 29.1 bits (62), Expect = 8.5
Identities = 30/143 (20%), Positives = 31/143 (21%), Gaps = 1/143 (0%)
Frame = +3
Query: 348 NXPKTPPXPPXPXPPPXXNPTHXXQXARXXPKXXXXPQXNXXXXXXTRXXPXPGGXXRXX 527
N PP PP P PP P + P P P P
Sbjct: 87 NFSPNPPYPPPPYPPYPPPPPYPPP---PNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPS 143
Query: 528 PNXTXXHPPXXXKXPXXXXXXXR-XXQXAPXPPXXTXXXPXXTXRPRGXXXXTXPXXGXX 704
PN PP P AP PP P P P
Sbjct: 144 PNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPN 203
Query: 705 GXRXXXPXPTRXXXTKXXPPPGP 773
P P PP P
Sbjct: 204 PPPPNPPYPPPPNAPNPPYPPPP 226
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP P P P P PP P PPPP
Sbjct: 180 PPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPP 215
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 31.1 bits (67), Expect = 2.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 354 PKTPPXPPXPXPPPXXNP 407
P+ PP PP P PPP +P
Sbjct: 209 PRPPPSPPPPPPPPSPSP 226
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNPTHXXQXARXXPKXXXXP 458
P P P PP P P PPP P+ A P+ P
Sbjct: 209 PRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIP 252
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P P PP + P PPPP
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPP----RPPPPPPP 235
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXP 30
PP PPP P TP PP G P P
Sbjct: 693 PPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSP 725
Score = 29.9 bits (64), Expect = 4.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 354 PKTPPXPPXPXPPPXXNPT 410
P PP PP P PPP P+
Sbjct: 686 PPPPPPPPPPPPPPPPQPS 704
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 363 PPXPPXPXPPPXXNPTHXXQXARXXPKXXXXP 458
PP PP P PPP P Q + P P
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTP 714
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P PP G P PPPP
Sbjct: 712 PPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPP 747
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Frame = -3
Query: 140 LXVXPPXPPPGXP--XXXTPXXGPPFXTXXXXGGXPXXPPPP 21
L V PP PPP P P PP G P PP P
Sbjct: 691 LSVPPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSP 732
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 30.7 bits (66), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 354 PKTPPXPPXPXPPPXXNPT 410
P PP PP P PPP PT
Sbjct: 1311 PPPPPPPPPPPPPPPLPPT 1329
Score = 30.3 bits (65), Expect = 3.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 354 PKTPPXPPXPXPPPXXNP 407
P++PP PP P PPP P
Sbjct: 1308 PESPPPPPPPPPPPPPPP 1325
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 30.3 bits (65), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 336 PHXXNXPKTPPXPPXPXPPPXXNP 407
P P PP PP P PPP P
Sbjct: 862 PRPRRPPPPPPPPPPPPPPPPPPP 885
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 30.3 bits (65), Expect = 3.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 354 PKTPPXPPXPXPPPXXNPT 410
P PP PP P PPP +P+
Sbjct: 58 PPPPPPPPPPPPPPSSSPS 76
Score = 29.1 bits (62), Expect = 8.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 354 PKTPPXPPXPXPPPXXNPT 410
P PP PP P PPP P+
Sbjct: 54 PPPPPPPPPPPPPPPPPPS 72
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 30.3 bits (65), Expect = 3.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPF 69
PP PPPG P P PPF
Sbjct: 199 PPPPPPGFPGGAPPPPPPPF 218
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 30.3 bits (65), Expect = 3.7
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 128 PPXPPPGXPXXXTPXXGPPFXTXXXXGGXPXXPPPP 21
PP PPP P PPF GG P PPPP
Sbjct: 178 PPAPPP--PGAPAAPPAPPF------GGPPSAPPPP 205
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.5 bits (63), Expect = 6.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXNP 407
P P P PP PP P PPP P
Sbjct: 93 PACPPACCAPPPPPPPPPPPPPPPPPP 119
Score = 29.1 bits (62), Expect = 8.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 354 PKTPPXPPXPXPPPXXNPTHXXQ 422
P PP PP P PPP H Q
Sbjct: 105 PPPPPPPPPPPPPPPPITLHHEQ 127
Score = 27.5 bits (58), Expect(2) = 4.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 363 PPXPPXPXPPPXXNPTHXXQ 422
PP PP P P P P H Q
Sbjct: 138 PPPPPPPPPAPCMPPCHQTQ 157
Score = 21.0 bits (42), Expect(2) = 4.4
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXP 383
P P P PP PP P
Sbjct: 102 PPPPPPPPPPPPPPPPPPP 120
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXN 404
P GP P PP PP P PP N
Sbjct: 627 PPGPASPPSPPGPPGPPGPKGPPGPN 652
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXN 404
P GP P PP PP P PP N
Sbjct: 712 PPGPASPPSPPGPPGPPGPNGPPGPN 737
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXN 404
P GP P PP PP P PP N
Sbjct: 797 PPGPASPPSPPGPPGPPGPKGPPGPN 822
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPPXXN 404
P GP P PP PP P PP N
Sbjct: 882 PPGPASPPSPPGPPGPPGPKGPPGPN 907
>SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 276
Score = 29.1 bits (62), Expect = 8.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPP 395
P P P PP PP P PPP
Sbjct: 59 PTVPIPPTLPPPPPPPPPPLPPP 81
>SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 500
Score = 29.1 bits (62), Expect = 8.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 327 PXGPHXXNXPKTPPXPPXPXPPP 395
P P P PP PP P PPP
Sbjct: 283 PTVPIPPTLPPPPPPPPPPLPPP 305
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.136 0.448
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,346,673
Number of Sequences: 59808
Number of extensions: 266329
Number of successful extensions: 2292
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 4270725770
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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