BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H14
(870 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14QM2 Cluster: Putative uncharacterized protein; n=1; ... 40 0.062
UniRef50_A6LUU2 Cluster: Putative uncharacterized protein; n=1; ... 39 0.19
UniRef50_A6EKJ1 Cluster: Two-component system sensor histidine k... 38 0.25
UniRef50_A3ZGQ1 Cluster: Phosphomannomutase/phosphoglucomutase; ... 36 1.0
UniRef50_A0RZ99 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_A0DWA4 Cluster: Chromosome undetermined scaffold_67, wh... 35 2.3
UniRef50_Q6F0Y3 Cluster: Putative lipase; n=1; Mesoplasma florum... 35 3.1
UniRef50_Q1WVL2 Cluster: Two component system histidine kinase; ... 34 4.1
UniRef50_Q47Y81 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
UniRef50_Q03TF4 Cluster: Predicted membrane protein; n=1; Lactob... 33 7.1
UniRef50_A6LX66 Cluster: Mug G:T/U mismatch-specific DNA glycosy... 33 7.1
UniRef50_A1S501 Cluster: DNA polymerase; n=1; Shewanella amazone... 33 7.1
UniRef50_Q4DWJ4 Cluster: Putative uncharacterized protein; n=2; ... 33 7.1
UniRef50_Q4HS78 Cluster: Xanthine/uracil permease family protein... 33 9.4
UniRef50_Q7QUD2 Cluster: GLP_59_34849_36189; n=1; Giardia lambli... 33 9.4
UniRef50_Q6T364 Cluster: Cation-transporting ATPase; n=8; Caenor... 33 9.4
>UniRef50_Q14QM2 Cluster: Putative uncharacterized protein; n=1;
Spiroplasma citri|Rep: Putative uncharacterized protein
- Spiroplasma citri
Length = 179
Score = 40.3 bits (90), Expect = 0.062
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +3
Query: 429 YLGHKDGIYVYDTETEKLEKYGNLSDSIMGIVKEXRTDDLYILTEDHVVYKVIEEGT-KK 605
Y G GIY + K++K + D+++ + + + +++Y TED+ Y G+ K
Sbjct: 66 YFGTSQGIYFLPNDATKVKKINGIDDNVIALTVD-KENNIYYATEDYQAYIYYNNGSIVK 124
Query: 606 IK-VNEA---EHAEQIALDWDDXLY 668
I+ +N+ H +ALD +D LY
Sbjct: 125 IEGLNDELDDNHITALALDSNDTLY 149
>UniRef50_A6LUU2 Cluster: Putative uncharacterized protein; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: Putative
uncharacterized protein - Clostridium beijerinckii NCIMB
8052
Length = 522
Score = 38.7 bits (86), Expect = 0.19
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 462 DTETEKLEKY--GNLSDSIMGIVKEXRTDDLYILTEDHVVYKVIEEGTKKIKVNE 620
D + E+LEK L++ + I+ E DDL TED V +VIEE K KV++
Sbjct: 73 DEKKEELEKCTRNELNERLFNILSEKANDDLESATEDEVSIEVIEEAAKLYKVHK 127
>UniRef50_A6EKJ1 Cluster: Two-component system sensor histidine
kinase/response regulator, hybrid; n=1; Pedobacter sp.
BAL39|Rep: Two-component system sensor histidine
kinase/response regulator, hybrid - Pedobacter sp. BAL39
Length = 642
Score = 38.3 bits (85), Expect = 0.25
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +3
Query: 429 YLGHKDGIYVYDTETEKLEKYGNLSDSIMGIVKEXRTDDLYILTEDHVVYKVIEEGTKKI 608
++G DGIY+++ ETE ++ L + + V R D++I T++ V+ TKKI
Sbjct: 102 WIGTDDGIYIFNLETEIFTRFKPLKNYFINDVTRSRNGDIWIATKEKGVF-CFSPKTKKI 160
Query: 609 K 611
+
Sbjct: 161 R 161
>UniRef50_A3ZGQ1 Cluster: Phosphomannomutase/phosphoglucomutase;
n=16; Campylobacter|Rep:
Phosphomannomutase/phosphoglucomutase - Campylobacter
jejuni subsp. jejuni 84-25
Length = 456
Score = 36.3 bits (80), Expect = 1.0
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Frame = +3
Query: 411 FSKSRAYLGHKDGIYVYDTETEKLEKYGNLSDSIMGIVKEXRTDDLYILTEDHVVYKVIE 590
F K R Y G+ DGIY + E + K +L I + K T ++ I + +K++E
Sbjct: 323 FFKHR-YFGYDDGIYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIPVNEEEKFKLVE 381
Query: 591 EGTKKIKVNEAEHAEQIA------LDWDDXLYYIGANN-QPYVV 701
E K+I+ + + + +D+ D + A+N PY++
Sbjct: 382 EFQKEIEKGALKGVKSLCEIDGARIDFGDGWALLRASNTSPYLI 425
>UniRef50_A0RZ99 Cluster: Putative uncharacterized protein; n=1;
Cenarchaeum symbiosum|Rep: Putative uncharacterized
protein - Cenarchaeum symbiosum
Length = 742
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 474 EKLEKYGNLSDSIMGIVKEXRTDDLYILTEDHVVYKVIEEGTKKIKVNEAEHAEQ 638
E L K+GN + +M + T D++++T V K I+EG +++ N EH+ +
Sbjct: 126 EFLSKFGNSEEELMRWILTGGTPDIFMMTTILQVRKKIDEGKIELEKNRLEHSNK 180
>UniRef50_A0DWA4 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 537
Score = 35.1 bits (77), Expect = 2.3
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Frame = +3
Query: 270 GIFDSKTTILILRYVTTGDKKEYKGIYAHK---NGKVKKILAGGRAFSDWFSKSRAYLGH 440
GIF ++ + L Y TT +E KGI + +KK+L S ++
Sbjct: 147 GIFSAELNMAFLFYQTTLIIQEEKGILVSQTITEMAIKKVLC---------SLGHIFIAT 197
Query: 441 KDGIYVYDTETEK----LEKYGNLSDSIMGIVKEXRTDDLYILTEDHV-VYKVIEEGTKK 605
KDG+ VY + L+ + + +I IV + +++L ED + +Y+++ + K+
Sbjct: 198 KDGMLVYQIDVGNQMITLKSHIEQNHTINDIVLSAKNQYIFLLEEDGIHIYRILFDNEKQ 257
Query: 606 IKVNE 620
I++ +
Sbjct: 258 IQIKK 262
>UniRef50_Q6F0Y3 Cluster: Putative lipase; n=1; Mesoplasma
florum|Rep: Putative lipase - Mesoplasma florum
(Acholeplasma florum)
Length = 381
Score = 34.7 bits (76), Expect = 3.1
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Frame = +3
Query: 447 GIYVYDTETEKLEKYGNLSDSIMGIVKEXRTDDLYILTEDHVVYKVIEEGTKKIKVNEAE 626
GI Y+ E K +SDS G +K + ++ V +K + + +I N+ +
Sbjct: 189 GIVKYNEEFSKYNIKWAISDSYYGSIKTLLVHTRNVWLKNLVSHKRVGKSINRIIKNQIQ 248
Query: 627 HAEQIALDWDD---XLYYIGANNQPYVVXFGRCEQDRRSSXQSNLXVVLXGSNHDR-XXI 794
+ LDW+D YY + + F C D + ++ + + S H R I
Sbjct: 249 DTD---LDWNDLDVFKYYESDLKMIFPMFFLHCRNDNVTPFDDSMRLFVKRSIHSRDDEI 305
Query: 795 LVY 803
L+Y
Sbjct: 306 LIY 308
>UniRef50_Q1WVL2 Cluster: Two component system histidine kinase;
n=1; Lactobacillus salivarius subsp. salivarius
UCC118|Rep: Two component system histidine kinase -
Lactobacillus salivarius subsp. salivarius (strain
UCC118)
Length = 433
Score = 34.3 bits (75), Expect = 4.1
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 435 GHKDGIYVYDTETEKLEKYGNLSDSIMGIVKEXRTDDLYILTEDHVVYKVIEEG-TKKIK 611
G + + +YD+ + + +Y N+ + + + + DL TE +VV+++IEE T I+
Sbjct: 305 GALEKLSLYDSIVDMISRYDNIPTLTIDLDFQWQGVDLEKTTE-NVVFRIIEESITNSIR 363
Query: 612 VNEAEHAEQIALDWDDXLYYI 674
AE I + DD YYI
Sbjct: 364 HGHAEKI-WIRMTKDDKYYYI 383
>UniRef50_Q47Y81 Cluster: Putative uncharacterized protein; n=1;
Colwellia psychrerythraea 34H|Rep: Putative
uncharacterized protein - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 977
Score = 33.9 bits (74), Expect = 5.4
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +3
Query: 429 YLGHKDGIYVYDTETEKLEKYGNLSDSIMGIVKEXRTDDLYILTEDHVVYKVIEEGTKKI 608
Y+ DG++ YD EK+ K ++D ++ +K + + LYI T D +Y + + +KKI
Sbjct: 426 YIASFDGLWRYDKNQEKVSKLNIIADQLVLKLKH-KNNLLYIATNDDGLY-IYDLNSKKI 483
>UniRef50_Q03TF4 Cluster: Predicted membrane protein; n=1;
Lactobacillus brevis ATCC 367|Rep: Predicted membrane
protein - Lactobacillus brevis (strain ATCC 367 / JCM
1170)
Length = 906
Score = 33.5 bits (73), Expect = 7.1
Identities = 19/80 (23%), Positives = 35/80 (43%)
Frame = +3
Query: 282 SKTTILILRYVTTGDKKEYKGIYAHKNGKVKKILAGGRAFSDWFSKSRAYLGHKDGIYVY 461
+KT + + ++ K Y G Y H N V AG ++S + H G +
Sbjct: 521 TKTNLHRVEFLHANIAKAYDGAYNHYNDPVMFNYAGISSYSSTLIEQSRVFQHDLGYFSP 580
Query: 462 DTETEKLEKYGNLSDSIMGI 521
+ + Y +L+D++MG+
Sbjct: 581 NVRRISAQGYTHLTDTLMGV 600
>UniRef50_A6LX66 Cluster: Mug G:T/U mismatch-specific DNA
glycosylase; n=3; Clostridiales|Rep: Mug G:T/U
mismatch-specific DNA glycosylase - Clostridium
beijerinckii NCIMB 8052
Length = 160
Score = 33.5 bits (73), Expect = 7.1
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Frame = +3
Query: 273 IFDSKTTILILRYVTTGDKKEYKGIYAHKNGKVKKILAG---GRAFSDWFSKSRAYLGHK 443
I+D K+ ILIL + +E + YA+ + K++AG + F K L
Sbjct: 11 IYDEKSRILILGTFPSVQSREAQFYYANARNRFWKVIAGIFDCNEANTTFDKKDMLL--N 68
Query: 444 DGIYVYDTETEKLEKYGNLSDSIMGIVKEXRTDDLYILTEDHVVYKVIEEGTKKIKV 614
+GI ++D E E G+ SI +V DL I+ + + K+ G K K+
Sbjct: 69 NGIALWDV-IESCEITGSSDSSIKNVVPA----DLSIVLNNASIEKIYANGDKAFKL 120
>UniRef50_A1S501 Cluster: DNA polymerase; n=1; Shewanella
amazonensis SB2B|Rep: DNA polymerase - Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B)
Length = 801
Score = 33.5 bits (73), Expect = 7.1
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Frame = +3
Query: 303 LRYVTTGDKKEYKGIYAHKNGKVKKILAGGRAFSDWFSKSRAY-------LGHKDGIYVY 461
LR+ T G KK Y G+Y + N KV + SDW +R L ++ + Y
Sbjct: 627 LRHSTEGSKKRYVGLYDNGNEKVLVFKGMEQVRSDWSPLARRVQYELYRRLFQQENLTEY 686
Query: 462 DTETEKLEKYGNLSDSIM 515
E EK G L D ++
Sbjct: 687 VQEVEKSLYSGELDDELV 704
>UniRef50_Q4DWJ4 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 727
Score = 33.5 bits (73), Expect = 7.1
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 667 TTSERTINRMLSLSDG-ANKIEGLPXNPTSXSF-FXAPITTXHXSWFMSGKXPYIIY 831
T+ E +NR+LS + EGLP NPTS + AP H ++ G+ + Y
Sbjct: 564 TSDEAMVNRLLSCVERRVRTAEGLPPNPTSTALSLDAPACGCHNHYYRLGREVPVYY 620
>UniRef50_Q4HS78 Cluster: Xanthine/uracil permease family protein;
n=19; Proteobacteria|Rep: Xanthine/uracil permease
family protein - Campylobacter upsaliensis RM3195
Length = 451
Score = 33.1 bits (72), Expect = 9.4
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 308 LRNYG*QERVQGYIRPQERQSEKNFSRRQGLLRLVFEV 421
++NYG + ++G I P E S NFSR GL + FE+
Sbjct: 211 MQNYGVKLNIEGAIFPNEIFSLPNFSRENGLGAIAFEL 248
>UniRef50_Q7QUD2 Cluster: GLP_59_34849_36189; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_59_34849_36189 - Giardia lamblia
ATCC 50803
Length = 446
Score = 33.1 bits (72), Expect = 9.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 372 KKILAGGRAFSDWFSKSRAYLGHKDGIYVYDTETEKLEKYGNLSDSIMG 518
K +++G ++ S W K +YL ++ + +DT+ + E G L D +G
Sbjct: 394 KLVVSGDKSLSVWSGKRSSYLEQENDVSTHDTDADS-ESSGELGDRALG 441
>UniRef50_Q6T364 Cluster: Cation-transporting ATPase; n=8;
Caenorhabditis|Rep: Cation-transporting ATPase -
Caenorhabditis elegans
Length = 1252
Score = 33.1 bits (72), Expect = 9.4
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 570 VVYK-VIEEGTKKIKVNEAEHAEQIALDWDD 659
V YK +I++GT+ ++ E E AE +DWDD
Sbjct: 661 VAYKTIIKKGTRDVEKTEIEFAEDSDIDWDD 691
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,947,747
Number of Sequences: 1657284
Number of extensions: 12715807
Number of successful extensions: 35136
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 33716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35101
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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