Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H14
         (870 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch...    29   0.65 
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa...    29   1.1  
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy...    27   4.6  
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc...    26   6.1  
SPBPB21E7.04c ||SPAPB21E7.04c, SPAPB21E7.04c|S-adenosylmethionin...    26   8.0  

>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
           Zds1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 938

 Score = 29.5 bits (63), Expect = 0.65
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +3

Query: 462 DTETEKLEKYGNLSDSIMGIVKEXRTDDLYILTEDH--VVYKVIEEGTKKIKVNEAEHAE 635
           DT +  LE   +L      + ++ + DD  I  +D   +V K   +  + +++NE EH E
Sbjct: 214 DTSSSPLEHIRSLRRRKSLLSRQVKADDAVINYQDGSPIVEKAYLKRHRSLRLNELEHLE 273

Query: 636 QIALD 650
            +A D
Sbjct: 274 SLARD 278


>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
           Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 421

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 20/98 (20%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
 Frame = +3

Query: 405 DWFSKSRAYLGHKDGIYVYDTETEKLEKYGNL--SDSIMGIVKEXRTDDLYILTEDHVVY 578
           DW   +   +G    IY++   + K+ +  +   ++ +  ++   +   L + T+  V+Y
Sbjct: 132 DWGQSNVLAVGLASSIYLWSAASGKVVQLHDFGATNHVTSVLWTGKGTQLAVGTDSGVIY 191

Query: 579 KVIEEGTKKIKVNEAEHAEQI-ALDWDDXLYYIGANNQ 689
               E TK ++  +  H+E++ AL W+D     G  ++
Sbjct: 192 IWDIESTKSVRSLKG-HSERVAALAWNDNTLTSGGKDE 228


>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 357

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 444 DGIYVYDTETEKLEKYGNLSDSIMGIVKEXRTDDLY 551
           DGIY YD   E  E   N  DS++G++ +  TD  +
Sbjct: 256 DGIY-YDAFAESYEDLRNFFDSVVGLL-DPETDSKF 289


>SPAC29B12.07 |sec16||multidomain vesicle coat component
            Sec16|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1995

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 330  KEYKGIYAHKNGKVKKILAGGRAFSDWFSK 419
            KE+KG Y   NGKV K   G     +W SK
Sbjct: 1145 KEFKGPYLASNGKVDK--HGKAEAIEWLSK 1172


>SPBPB21E7.04c ||SPAPB21E7.04c,
           SPAPB21E7.04c|S-adenosylmethionine-dependent
           methyltransferase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 281

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 10/53 (18%), Positives = 26/53 (49%)
 Frame = +3

Query: 453 YVYDTETEKLEKYGNLSDSIMGIVKEXRTDDLYILTEDHVVYKVIEEGTKKIK 611
           Y++    EKL++     D ++ ++ E      +++    +  K+I E  +++K
Sbjct: 42  YIFSLPREKLDQIRGKPDEVINVIDEYVEQGHFLMNIGKLKGKIISEKIQQVK 94


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,885,990
Number of Sequences: 5004
Number of extensions: 50923
Number of successful extensions: 147
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)