Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H14
         (870 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247           30   2.1  
01_06_0658 - 30942890-30943054,30943159-30943266,30943448-309435...    30   2.8  
11_01_0149 + 1247985-1248207,1248982-1249508                           29   3.7  
02_04_0082 - 19559626-19560152,19560927-19561149                       29   4.8  
12_02_0063 + 13098519-13099585,13099759-13099906                       28   8.5  
04_03_0376 + 15105874-15106230,15109207-15111573                       28   8.5  

>10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247
          Length = 722

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 393 RAFSDWFSKSRAYLGHKDGIYVYDTETEKLEKYGNLSDSIMGI 521
           RAF  W S    + G+ DG Y+ D ++  L+ Y +L   ++ +
Sbjct: 71  RAFLAWGSPDSPFQGNADGYYLSDNDSVTLKDYWSLPVELVDV 113


>01_06_0658 -
           30942890-30943054,30943159-30943266,30943448-30943598,
           30943683-30943780,30943869-30944020,30944298-30944403,
           30944499-30944588,30944668-30944813,30945396-30945695,
           30945953-30946038,30947260-30947996
          Length = 712

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -1

Query: 477 SLFLCRKRRYRPYGPNRRVTS-KTNLRRPCRLLKFFSLCRSCGRIYPC 337
           +L LC+  +Y P  PN +  S   ++    +LLK  S C   GR   C
Sbjct: 306 ALVLCKLSQYNPQAPNNQGKSPDQSISHKFQLLKSGSFCYGSGRYLCC 353


>11_01_0149 + 1247985-1248207,1248982-1249508
          Length = 249

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
 Frame = +3

Query: 264 TTGIFDSKTTILILRYVTTGDKKEYKGIYAHKNG--KVKKILAGGRAFSDWFSKSRAYLG 437
           TT   D+K   L+  Y++  D   +  I +   G  +  KI+  G   S+  S S   +G
Sbjct: 34  TTEHLDAK---LLHEYISPPDLPSHSVICSSSLGTHQSTKIVTTG---SEDHSFSLDSVG 87

Query: 438 HKDGIYVYDTETEKLEKYGN-LSDSIMGIVKEXRTDDLYILTEDHVVYKVIEEGTKKIKV 614
            KD  Y + +  E  +  G+ + D +  +VKE    +L   ++ +++  V+E+  K+ ++
Sbjct: 88  SKDHSYSFVSVVE--DTMGDAVEDKMYQVVKEDEPKELLRDSKVNLMANVVEDTMKEKEI 145

Query: 615 NEAEH 629
           NE +H
Sbjct: 146 NEDDH 150


>02_04_0082 - 19559626-19560152,19560927-19561149
          Length = 249

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
 Frame = +3

Query: 297 LILRYVTTGDKKEYKGIYAHKNG--KVKKILAGGRAFSDWFSKSRAYLGHKDGIYVYDTE 470
           L+  Y++  D   +  I +   G  +  KI+  G   S+  S S   +G KD  Y + + 
Sbjct: 42  LLHEYISPPDLPSHSVICSSSLGTHQSSKIVTTG---SEDHSFSLDSVGSKDHSYSFVSV 98

Query: 471 TEKLEKYGN-LSDSIMGIVKEXRTDDLYILTEDHVVYKVIEEGTKKIKVNEAEH 629
            E  +  G+ + D +  +VKE    +L   ++ +++  V+E+  K+ ++NE +H
Sbjct: 99  VE--DTMGDAVEDKMYQVVKEDEPKELLRDSKVNLMANVVEDTMKEKEINEDDH 150


>12_02_0063 + 13098519-13099585,13099759-13099906
          Length = 404

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/65 (29%), Positives = 33/65 (50%)
 Frame = +3

Query: 321 GDKKEYKGIYAHKNGKVKKILAGGRAFSDWFSKSRAYLGHKDGIYVYDTETEKLEKYGNL 500
           GD+  + G    K GK  +   GG     W S+S   L +++GI + + +  + +K GN 
Sbjct: 69  GDRFFFTGCKRVK-GKFSRSAGGGT----WVSQSSKDLKNREGIKIGEVKNFRFKKGGNN 123

Query: 501 SDSIM 515
           +D +M
Sbjct: 124 TDWLM 128


>04_03_0376 + 15105874-15106230,15109207-15111573
          Length = 907

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 588 EEGTKKIKVNEAEHAEQIALDWDDXLYYIGANNQPYVV 701
           EE   + K+ E EH +Q+ L WDD      +N+ P V+
Sbjct: 734 EEEAVEAKLAEKEHLKQLTLAWDDD--NTSSNHDPAVL 769


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,587,254
Number of Sequences: 37544
Number of extensions: 356290
Number of successful extensions: 884
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)