Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H14
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr...    33   0.27 
Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical pr...    33   0.27 
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr...    33   0.27 
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc...    33   0.27 
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc...    33   0.27 
AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPas...    33   0.27 
Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical
           protein W09C2.3c protein.
          Length = 1249

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 570 VVYK-VIEEGTKKIKVNEAEHAEQIALDWDD 659
           V YK +I++GT+ ++  E E AE   +DWDD
Sbjct: 658 VAYKTIIKKGTRDVEKTEIEFAEDSDIDWDD 688


>Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical
           protein W09C2.3b protein.
          Length = 1228

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 570 VVYK-VIEEGTKKIKVNEAEHAEQIALDWDD 659
           V YK +I++GT+ ++  E E AE   +DWDD
Sbjct: 637 VAYKTIIKKGTRDVEKTEIEFAEDSDIDWDD 667


>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical
           protein W09C2.3a protein.
          Length = 1252

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 570 VVYK-VIEEGTKKIKVNEAEHAEQIALDWDD 659
           V YK +I++GT+ ++  E E AE   +DWDD
Sbjct: 661 VAYKTIIKKGTRDVEKTEIEFAEDSDIDWDD 691


>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
           ATPase (136.9kD) (mca-1) protein.
          Length = 1249

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 570 VVYK-VIEEGTKKIKVNEAEHAEQIALDWDD 659
           V YK +I++GT+ ++  E E AE   +DWDD
Sbjct: 658 VAYKTIIKKGTRDVEKTEIEFAEDSDIDWDD 688


>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
           ATPase (136.6kD) (mca-1) protein.
          Length = 1252

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 570 VVYK-VIEEGTKKIKVNEAEHAEQIALDWDD 659
           V YK +I++GT+ ++  E E AE   +DWDD
Sbjct: 661 VAYKTIIKKGTRDVEKTEIEFAEDSDIDWDD 691


>AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPase
           protein.
          Length = 1228

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 570 VVYK-VIEEGTKKIKVNEAEHAEQIALDWDD 659
           V YK +I++GT+ ++  E E AE   +DWDD
Sbjct: 637 VAYKTIIKKGTRDVEKTEIEFAEDSDIDWDD 667


>Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical
           protein F58B4.1b protein.
          Length = 611

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -1

Query: 423 VTSKTNLRRPCRLLKFFSLCRSCGRIYPCTLSCH 322
           V S  +L   C   KFF +CRS      C  +CH
Sbjct: 529 VNSCQDLHPNCDFYKFFGMCRSKKIRSNCKFTCH 562


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,265,307
Number of Sequences: 27780
Number of extensions: 300812
Number of successful extensions: 927
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)