Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H11
         (918 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    46   0.002
UniRef50_Q61H39 Cluster: Putative uncharacterized protein CBG109...    34   4.4  
UniRef50_A7THR5 Cluster: Putative uncharacterized protein; n=1; ...    34   5.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = -3

Query: 517 LCXRCMDELTAHXVLNSYWSPXPIYNVNAP 428
           L  R +DELTAH VL+ YWSP  +Y+VNAP
Sbjct: 155 LLLRWVDELTAHLVLSGYWSPRHLYDVNAP 184


>UniRef50_Q61H39 Cluster: Putative uncharacterized protein CBG10908;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG10908 - Caenorhabditis
           briggsae
          Length = 164

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +3

Query: 183 TPCGADLCRPGIETHQ--LRDGFHRNXATVILGYLFNSEGKCVPVAEC 320
           TPC   LC P  E      R    R     I GY++N EG+C+P   C
Sbjct: 39  TPC-TQLCPPTCEAPNPTCRVDCTRPSCNCIQGYVYNHEGRCIPSTSC 85


>UniRef50_A7THR5 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 588

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
 Frame = -2

Query: 335 SASYSTFGN----GHAFSLRVEEVSQNHSGXVAMKAVTQLVCFNSGSAQVGTAGGSMSCE 168
           S+++STF +    G+ F++ V   S + SG  A  + +      SGS   GTA  S S  
Sbjct: 472 SSTWSTFSSISSGGNIFTVDVNTASASSSGSSATSSASSGSGAASGSTSSGTARSSSSAN 531

Query: 167 HFQDTISRTSSYWLREPSETRA 102
             Q T SR +S   R  S +R+
Sbjct: 532 SGQ-TTSRAASTTTRSSSSSRS 552


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,735,562
Number of Sequences: 1657284
Number of extensions: 11222752
Number of successful extensions: 21950
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21943
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84031265255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)