Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H11
         (918 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g14800.1 68415.m01677 hypothetical protein                          29   4.3  
At2g13770.1 68415.m01521 hypothetical protein                          29   5.7  

>At2g14800.1 68415.m01677 hypothetical protein
          Length = 580

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 163 FRTRFLEQALTGCESHQRHEQE 98
           F+T   E+A+TG E  Q HEQ+
Sbjct: 450 FKTELYEEAVTGTEHFQHHEQD 471


>At2g13770.1 68415.m01521 hypothetical protein 
          Length = 244

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 27  GILKI-FLIVRNTSLRWRQTLLHHVSCSCL 113
           G+L++ F IV   S  W +T+LH +  SC+
Sbjct: 170 GVLQLRFAIVAGPSRLWNKTVLHDIMTSCI 199


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,206,670
Number of Sequences: 28952
Number of extensions: 247352
Number of successful extensions: 509
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2178500352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)