Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H09
         (1227 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.28 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.85 
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    27   1.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   1.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   2.6  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   3.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   3.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.5  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   4.5  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 29.1 bits (62), Expect = 0.28
 Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
 Frame = -3

Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGX---XGXGGGPRGXXXXGXG 1067
            G G  G AG     LR+ + +A         GG G      G GGG  G    G G
Sbjct: 172  GGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGG 227



 Score = 27.1 bits (57), Expect = 1.1
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 1201 GGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGG 1100
            GGS     S + +    G RS  GG GG  G GG
Sbjct: 145  GGSGAIHASPNAQNPSSGGRSSSGGGGGGGGGGG 178



 Score = 24.6 bits (51), Expect = 6.0
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -2

Query: 362 GXXGGGXXXXGVGGGAWGXLXXXGXXGGXG 273
           G  G G    G GGG+ G     G  GG G
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 0.85
 Identities = 36/160 (22%), Positives = 40/160 (25%)
 Frame = +2

Query: 260 APXXXXPPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPPGXAXXXXXXXXXR 439
           AP    PPP           P RP     P       P+    P   G            
Sbjct: 158 APISHRPPPIAHQQAPFAMDPARPNPGMPPG------PQMMRPPGNVGPPRTGTPTQPQP 211

Query: 440 PHPXXAXPXPTXXHNAXRXXXXXXAHXTXXPXPAPRHXGHRGXXTPPTXXXRXPXPXPHN 619
           P P    P P       R      A     P   PR    +G   PP      P   P+ 
Sbjct: 212 PRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPN- 270

Query: 620 ARXPXKGXRQXPXPXPEARAXPXXPXXXXPAXRRPRPPXP 739
              P  G R    P     +         P    PRPP P
Sbjct: 271 ---PMGGPRPQISPQNSNLSGGMPSGMVGP----PRPPMP 303


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcription
            factor protein.
          Length = 593

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 1132 GGAGGXXGXGGGPRG 1088
            GG GG  G GGGP G
Sbjct: 14   GGGGGGGGGGGGPSG 28


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
 Frame = -3

Query: 1225 GAGXXGXAGGSXV--GLRSXSXRAXXXGX----RSXXGGAGGXXGXGGGPRGXXXXG 1073
            G G  G +GG  +  G  S +  A   G     R   GGAGG    GGG  G    G
Sbjct: 816  GGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGG 872



 Score = 25.4 bits (53), Expect = 3.4
 Identities = 15/44 (34%), Positives = 15/44 (34%)
 Frame = -3

Query: 1219 GXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRG 1088
            G  G AGG   G           G     GG GG  G  GG  G
Sbjct: 533  GAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGGVG 576


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -2

Query: 365 CGXXGGGXXXXGVGGGAWGXLXXXGXXGG 279
           CG  GG     G GGG  G     G  GG
Sbjct: 727 CGSIGGEVGSVGGGGGGGGSSVRDGNNGG 755


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 12/36 (33%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
 Frame = +1

Query: 949  GRQGPQARXPPHXXAXRGNXP-PPXPHXEHXXAQPP 1053
            G  GP    PPH      +   P  PH +H   Q P
Sbjct: 82   GSDGPMPAQPPHHHQHPHHHQLPHHPHHQHHPQQQP 117


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 12/36 (33%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
 Frame = +1

Query: 949  GRQGPQARXPPHXXAXRGNXP-PPXPHXEHXXAQPP 1053
            G  GP    PPH      +   P  PH +H   Q P
Sbjct: 82   GSDGPMPAQPPHHHQHPHHHQLPHHPHHQHHPQQQP 117


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -3

Query: 136 PXXXPPXXPPXXXXPXPXXGPPL 68
           P   PP  PP    P P  G PL
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPL 603



 Score = 24.6 bits (51), Expect = 6.0
 Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
 Frame = +3

Query: 1068 PXPXXXXPRGPPPXP--XXPPAPPXXERXP 1151
            P P    P GPPP P    P   P   R P
Sbjct: 583  PAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 14/40 (35%), Positives = 14/40 (35%)
 Frame = -1

Query: 396 GXGXXXXRGGXRXXXXGXXXXXGRGGXLGXXXXXGXAGGG 277
           G G     GG R    G     GRG   G     G  GGG
Sbjct: 58  GGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGG 97



 Score = 24.2 bits (50), Expect = 7.9
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = -3

Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPR 1091
            G G  G  GG   G             R    G GG  G G G R
Sbjct: 58   GGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDR 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.137    0.470 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,562
Number of Sequences: 2352
Number of extensions: 9528
Number of successful extensions: 110
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 139791474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)