Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H09
(1227 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.005
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.005
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.005
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 37 0.033
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 36 0.044
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 36 0.059
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 36 0.059
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.077
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.077
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.10
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.10
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.10
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 34 0.18
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 34 0.18
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 34 0.24
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.41
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 33 0.41
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.55
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.55
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 32 0.95
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 32 0.95
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 32 0.95
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.3
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 1.3
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 31 1.7
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 31 1.7
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 1.7
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 2.2
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 2.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 2.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.9
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 3.8
U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical pr... 30 3.8
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 30 3.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 3.8
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 30 3.8
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 30 3.8
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 5.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.7
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 6.7
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 6.7
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 6.7
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 6.7
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 8.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 8.9
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 8.9
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 29 8.9
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 8.9
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 29 8.9
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 29 8.9
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 29 8.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 8.9
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 29 8.9
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 8.9
U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical pr... 29 8.9
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 8.9
AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical ... 29 8.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 8.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.5 bits (88), Expect = 0.005
Identities = 34/146 (23%), Positives = 40/146 (27%), Gaps = 3/146 (2%)
Frame = +2
Query: 257 GAPXXXXPPPAXPXXXXXPRXPPRPXXXXXP---XXXXRXPPRXXXXPXPPGXAXXXXXX 427
G+P PP P PP P P PP P P G +
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 428 XXXRPHPXXAXPXPTXXHNAXRXXXXXXAHXTXXPXPAPRHXGHRGXXTPPTXXXRXPXP 607
P P PT + T P P PR +PPT P
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPT--GSPPTG 352
Query: 608 XPHNARXPXKGXRQXPXPXPEARAXP 685
P R P G + E+R P
Sbjct: 353 SPPTGRPPRGGPGKSSEESSESREGP 378
Score = 33.9 bits (74), Expect = 0.24
Identities = 22/95 (23%), Positives = 28/95 (29%)
Frame = +3
Query: 441 PTXXXPXRXPPXXTTPXAXXXXGAXTKPXXXXXPRGTPDTGXXXXXPXXAXXXXRXXRTT 620
PT P PP P G+ R P+ P + R R
Sbjct: 412 PTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGG 471
Query: 621 XGRPXKXTAXAPXRXPRRAPXPRXXXXXXPPXGGP 725
G+ + R PRR+P PP G P
Sbjct: 472 PGKSESSESREGPRGPRRSPPTGSPPTGSPPTGAP 506
Score = 32.7 bits (71), Expect = 0.55
Identities = 40/183 (21%), Positives = 46/183 (25%), Gaps = 6/183 (3%)
Frame = +3
Query: 243 PXXXAGPPXXXXPPXXXXXXQXAPGXPPDPXP-RXXPXXXPAXHXDXXXXPXPXDXQXXX 419
P PP PP A G PP P P P P P
Sbjct: 266 PPRTGSPPP---PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
Query: 420 AXXTXXDPTXXXPXRXPPXXTTPXAXXXXGAXTKPXXXXXPRGTPDTGXXXXXPXXAXXX 599
T P R P + P G+ P PRG P
Sbjct: 323 PAGTGSPPPPPRQKRQAPERSPPTGSPPTGS---PPTGRPPRGGPGKSSEESSESREGPR 379
Query: 600 XRXXRTTXGRPXKXTAXAPX-----RXPRRAPXPRXXXXXXPPXGGPDXPXPAXXXXXTA 764
G P K + + R PRR+P PP G P P T
Sbjct: 380 GGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTG 439
Query: 765 XPN 773
P+
Sbjct: 440 LPS 442
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.5 bits (88), Expect = 0.005
Identities = 34/146 (23%), Positives = 40/146 (27%), Gaps = 3/146 (2%)
Frame = +2
Query: 257 GAPXXXXPPPAXPXXXXXPRXPPRPXXXXXP---XXXXRXPPRXXXXPXPPGXAXXXXXX 427
G+P PP P PP P P PP P P G +
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 428 XXXRPHPXXAXPXPTXXHNAXRXXXXXXAHXTXXPXPAPRHXGHRGXXTPPTXXXRXPXP 607
P P PT + T P P PR +PPT P
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPT--GSPPTG 373
Query: 608 XPHNARXPXKGXRQXPXPXPEARAXP 685
P R P G + E+R P
Sbjct: 374 SPPTGRPPRGGPGKSSEESSESREGP 399
Score = 33.9 bits (74), Expect = 0.24
Identities = 22/95 (23%), Positives = 28/95 (29%)
Frame = +3
Query: 441 PTXXXPXRXPPXXTTPXAXXXXGAXTKPXXXXXPRGTPDTGXXXXXPXXAXXXXRXXRTT 620
PT P PP P G+ R P+ P + R R
Sbjct: 433 PTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGG 492
Query: 621 XGRPXKXTAXAPXRXPRRAPXPRXXXXXXPPXGGP 725
G+ + R PRR+P PP G P
Sbjct: 493 PGKSESSESREGPRGPRRSPPTGSPPTGSPPTGAP 527
Score = 32.7 bits (71), Expect = 0.55
Identities = 40/183 (21%), Positives = 46/183 (25%), Gaps = 6/183 (3%)
Frame = +3
Query: 243 PXXXAGPPXXXXPPXXXXXXQXAPGXPPDPXP-RXXPXXXPAXHXDXXXXPXPXDXQXXX 419
P PP PP A G PP P P P P P
Sbjct: 287 PPRTGSPPP---PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
Query: 420 AXXTXXDPTXXXPXRXPPXXTTPXAXXXXGAXTKPXXXXXPRGTPDTGXXXXXPXXAXXX 599
T P R P + P G+ P PRG P
Sbjct: 344 PAGTGSPPPPPRQKRQAPERSPPTGSPPTGS---PPTGRPPRGGPGKSSEESSESREGPR 400
Query: 600 XRXXRTTXGRPXKXTAXAPX-----RXPRRAPXPRXXXXXXPPXGGPDXPXPAXXXXXTA 764
G P K + + R PRR+P PP G P P T
Sbjct: 401 GGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTG 460
Query: 765 XPN 773
P+
Sbjct: 461 LPS 463
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.5 bits (88), Expect = 0.005
Identities = 34/146 (23%), Positives = 40/146 (27%), Gaps = 3/146 (2%)
Frame = +2
Query: 257 GAPXXXXPPPAXPXXXXXPRXPPRPXXXXXP---XXXXRXPPRXXXXPXPPGXAXXXXXX 427
G+P PP P PP P P PP P P G +
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 428 XXXRPHPXXAXPXPTXXHNAXRXXXXXXAHXTXXPXPAPRHXGHRGXXTPPTXXXRXPXP 607
P P PT + T P P PR +PPT P
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPT--GSPPTG 358
Query: 608 XPHNARXPXKGXRQXPXPXPEARAXP 685
P R P G + E+R P
Sbjct: 359 SPPTGRPPRGGPGKSSEESSESREGP 384
Score = 33.9 bits (74), Expect = 0.24
Identities = 22/95 (23%), Positives = 28/95 (29%)
Frame = +3
Query: 441 PTXXXPXRXPPXXTTPXAXXXXGAXTKPXXXXXPRGTPDTGXXXXXPXXAXXXXRXXRTT 620
PT P PP P G+ R P+ P + R R
Sbjct: 418 PTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGG 477
Query: 621 XGRPXKXTAXAPXRXPRRAPXPRXXXXXXPPXGGP 725
G+ + R PRR+P PP G P
Sbjct: 478 PGKSESSESREGPRGPRRSPPTGSPPTGSPPTGAP 512
Score = 32.7 bits (71), Expect = 0.55
Identities = 40/183 (21%), Positives = 46/183 (25%), Gaps = 6/183 (3%)
Frame = +3
Query: 243 PXXXAGPPXXXXPPXXXXXXQXAPGXPPDPXP-RXXPXXXPAXHXDXXXXPXPXDXQXXX 419
P PP PP A G PP P P P P P
Sbjct: 272 PPRTGSPPP---PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
Query: 420 AXXTXXDPTXXXPXRXPPXXTTPXAXXXXGAXTKPXXXXXPRGTPDTGXXXXXPXXAXXX 599
T P R P + P G+ P PRG P
Sbjct: 329 PAGTGSPPPPPRQKRQAPERSPPTGSPPTGS---PPTGRPPRGGPGKSSEESSESREGPR 385
Query: 600 XRXXRTTXGRPXKXTAXAPX-----RXPRRAPXPRXXXXXXPPXGGPDXPXPAXXXXXTA 764
G P K + + R PRR+P PP G P P T
Sbjct: 386 GGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTG 445
Query: 765 XPN 773
P+
Sbjct: 446 LPS 448
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 36.7 bits (81), Expect = 0.033
Identities = 21/53 (39%), Positives = 21/53 (39%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G R G R GG GG G GGG RG G G
Sbjct: 85 GGGGNG-GGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGRG 136
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = -1
Query: 468 GXGXAXXGWGRXXXXXXXXLAXPGGXGXXXXRGGXRXXXXGXXXXXGRGGXLGXXXXXGX 289
G G GWGR GG G G G GRGG G G
Sbjct: 47 GWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGG 106
Query: 288 AGGGXXXXG 262
GGG G
Sbjct: 107 GGGGRGGGG 115
Score = 34.3 bits (75), Expect = 0.18
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G G R GG G G GGG RG G G
Sbjct: 77 GGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRG 129
Score = 33.1 bits (72), Expect = 0.41
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = -3
Query: 1219 GXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G GG+ G R G GG GG G GGG G G G
Sbjct: 76 GGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G + G G GG G GGG G G G
Sbjct: 58 GGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGG 110
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 362 GXXGGGXXXXGVGGGAWGXLXXXGXXGGXGXXXGPRXAXG 243
G GGG G GGG G G GG G G R G
Sbjct: 93 GRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGG 132
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G+G G GG G G GG G G GGG RG G G
Sbjct: 61 GSGWGGGRGGGW-GNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRG 112
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G G + G G GG GG G GGG G G G
Sbjct: 65 GGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGG 117
Score = 28.7 bits (61), Expect = 8.9
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = -1
Query: 462 GXAXXGWGRXXXXXXXXLAXPGGXGXXXXRGGXRXXXXGXXXXXGRGGXLGXXXXXGXAG 283
G GWG GG G GG GRGG G G G
Sbjct: 66 GGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
Query: 282 GGXXXXG 262
GG G
Sbjct: 126 GGRGGGG 132
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 36.3 bits (80), Expect = 0.044
Identities = 40/168 (23%), Positives = 46/168 (27%), Gaps = 3/168 (1%)
Frame = +2
Query: 281 PPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPPGX---AXXXXXXXXXRPHPX 451
P + P PP P P P+ P PP P+P
Sbjct: 15 PESAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQ 74
Query: 452 XAXPXPTXXHNAXRXXXXXXAHXTXXPXPAPRHXGHRGXXTPPTXXXRXPXPXPHNARXP 631
A P P + A P PAP PP P P P +A
Sbjct: 75 HAVPAPAPPLASY----PQNAVPVPAPPPAPYPQHAVPAPAPP------PAPYPQHAVPA 124
Query: 632 XKGXRQXPXPXPEARAXPXXPXXXXPAXRRPRPPXPXXXTAXHRAPXP 775
+Q P P P P P P PP P H AP P
Sbjct: 125 PAPYQQQPPPPPPPPHYPPPPPHYPPP-----PPAPHSAYIDHSAPRP 167
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXP 1151
P P P PPP P PP PP P
Sbjct: 125 PAPYQQQPPPPPPPPHYPPPPPHYPPPP 152
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPP 1133
P P P PPP P PP PP
Sbjct: 132 PPPPPPPPHYPPPPPHYPPPPP 153
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -3
Query: 199 PAPPPSPXXXXAXXXXXRGXXPXXXPPXXPPXXXXPXPXXGPP 71
PAPPP+P A PP PP P P PP
Sbjct: 110 PAPPPAPYPQHAVPAPAP-YQQQPPPPPPPPHYPPPPPHYPPP 151
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 35.9 bits (79), Expect = 0.059
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPX---PXXPP-APPXXERXPXXXARXDXXRSPTXEPPAXPXXPAP 1226
P P PR PPP P PP PP +R P R+P PP+ P P P
Sbjct: 140 PPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPS-PIPPPP 195
Score = 33.9 bits (74), Expect = 0.24
Identities = 27/124 (21%), Positives = 32/124 (25%)
Frame = +2
Query: 368 PPRXXXXPXPPGXAXXXXXXXXXRPHPXXAXPXPTXXHNAXRXXXXXXAHXTXXPXPAPR 547
PP P P A P+ P P + + P P PR
Sbjct: 71 PPYPYQHPHQPPPAHPHHLQHP-HPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPR 129
Query: 548 HXGHRGXXTPPTXXXRXPXPXPHNARXPXKGXRQXPXPXPEARAXPXXPXXXXPAXRRPR 727
G PP R P P + P + P P P P P P
Sbjct: 130 KSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPS 189
Query: 728 PPXP 739
P P
Sbjct: 190 PIPP 193
Score = 33.1 bits (72), Expect = 0.41
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 236 PXAXXXGGAPXXXXPPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXP 397
P GG+ PPP P PR PP P R PPR P P
Sbjct: 128 PRKSRAGGSSPPPPPPPRVPRTPP-PRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
Score = 31.1 bits (67), Expect = 1.7
Identities = 22/72 (30%), Positives = 23/72 (31%)
Frame = +1
Query: 244 PXAXRGPXXXPXPPXXPXXXXXPQAPPPTPXXXXPPPXXPXXTXTXXXXXXPXTXKXXXR 423
P R P PP P P+ PPP PPP P T P T
Sbjct: 128 PRKSRAGGSSPPPPPPPRV---PRTPPP----RSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
Query: 424 RXRXXTPPXXGP 459
R TPP P
Sbjct: 181 RNPPRTPPSPIP 192
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 35.9 bits (79), Expect = 0.059
Identities = 36/173 (20%), Positives = 50/173 (28%), Gaps = 2/173 (1%)
Frame = +2
Query: 263 PXXXXPPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXP-PGXAXXXXXXXXXR 439
P P P P+ P+P P + P+ P P P +
Sbjct: 155 PKLKSKPNPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPK 214
Query: 440 PHPXXAXPXPTXXHNAXRXXXXXXAHXTXXPXPAPRHXGHRGXXTPPTXXXRXPXPXPHN 619
P P P P + + P P P+ + P T P P P
Sbjct: 215 PKP-EPKPKPKP---KPKPKPKPNPNPKPEPKPKPK-PKPKPEPKPKTKLKSEPKPKPKL 269
Query: 620 ARXPXKGXRQXPXPXPEARAXPXXPXXXXPAXRRPRP-PXPXXXTAXHRAPXP 775
P + P P PE + P P +P P P P + + P P
Sbjct: 270 KPKPKPNPKPEPNPMPELKPKPKHKPNSRP---KPNPRPKPKPRSKPNPKPKP 319
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.077
Identities = 30/118 (25%), Positives = 32/118 (27%)
Frame = +2
Query: 278 PPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPPGXAXXXXXXXXXRPHPXXA 457
PPP P PR PP P P PP P PPG R P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPP---PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM 330
Query: 458 XPXPTXXHNAXRXXXXXXAHXTXXPXPAPRHXGHRGXXTPPTXXXRXPXPXPHNARXP 631
P R P P PR+ PP R P P + P
Sbjct: 331 GGMPPPPPPGMRYPGG------MPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIP 382
Score = 31.9 bits (69), Expect = 0.95
Identities = 24/99 (24%), Positives = 27/99 (27%), Gaps = 2/99 (2%)
Frame = +1
Query: 274 PXPPXXPXXXXXPQAPPPTPXXXXPPPXXPXXTXTXXXXXXPXTXKXXXRRXRXXTPPXX 453
P PP P P PPTP P P P + P + PP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGM-TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 454 GPXAXHRPAQ--RXPXXPXXXRXXNXXPXPXPAAXRTPG 564
P P P P R P P P + G
Sbjct: 321 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Score = 31.9 bits (69), Expect = 0.95
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 262 PXXXPXPPXXPXXXXXPQAPPPTPXXXXPPPXXP 363
P P PP P P PPP P PP P
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP 314
Score = 29.9 bits (64), Expect = 3.8
Identities = 28/106 (26%), Positives = 30/106 (28%), Gaps = 6/106 (5%)
Frame = +1
Query: 262 PXXXPX-PPXXPXXXXXPQAPPPTPXXXXPPPXXPXXTXTXXXXXXPXTXKXXXRRXRXX 438
P P PP P P+ PPP PPP P T P R
Sbjct: 268 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP-PSRFG 326
Query: 439 TPPXXGPXAXHRPAQRXP---XXPXXXRXXNXXP--XPXPAAXRTP 561
P G P R P P R + P P P R P
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXP 1220
P P GPP PP PP R P R P+ P P P
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
Score = 29.5 bits (63), Expect = 5.1
Identities = 31/134 (23%), Positives = 32/134 (23%), Gaps = 4/134 (2%)
Frame = +2
Query: 278 PPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPPGXAXXXXXXXXXRPHPXXA 457
PP P P PP P P R PP PP P
Sbjct: 261 PPVPPPPPSVTPMPPPMP---PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 317
Query: 458 XPXPTXXHNAXRXXXXXXAHXTXXPXPAPRHXGHRGXXTPP----TXXXRXPXPXPHNAR 625
P P R P P R+ G PP P P P
Sbjct: 318 PPPP-----PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Query: 626 XPXKGXRQXPXPXP 667
P G P P P
Sbjct: 373 APPSGHGMIPPPPP 386
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 1089 PRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXP 1220
P PPP P P PP P R S PP P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
Score = 29.1 bits (62), Expect = 6.7
Identities = 31/126 (24%), Positives = 32/126 (25%), Gaps = 4/126 (3%)
Frame = +2
Query: 368 PPRXXXXPXPPGXAXXXXXXXXXRPHPXXAXPXPTXXHNAXRXXXXXXAHXTXXPXPAPR 547
PP P PP P P P R P P R
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
Query: 548 HX--GHRGXXTPPTXXXRXPX--PXPHNARXPXKGXRQXPXPXPEARAXPXXPXXXXPAX 715
G G PP R P P P R P G P P P + P P
Sbjct: 325 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP---SRPPAPPSGHGMI 381
Query: 716 RRPRPP 733
P PP
Sbjct: 382 PPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.077
Identities = 30/118 (25%), Positives = 32/118 (27%)
Frame = +2
Query: 278 PPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPPGXAXXXXXXXXXRPHPXXA 457
PPP P PR PP P P PP P PPG R P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPP---PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGM 340
Query: 458 XPXPTXXHNAXRXXXXXXAHXTXXPXPAPRHXGHRGXXTPPTXXXRXPXPXPHNARXP 631
P R P P PR+ PP R P P + P
Sbjct: 341 GGMPPPPPPGMRYPGG------MPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIP 392
Score = 31.9 bits (69), Expect = 0.95
Identities = 24/99 (24%), Positives = 27/99 (27%), Gaps = 2/99 (2%)
Frame = +1
Query: 274 PXPPXXPXXXXXPQAPPPTPXXXXPPPXXPXXTXTXXXXXXPXTXKXXXRRXRXXTPPXX 453
P PP P P PPTP P P P + P + PP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGM-TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 454 GPXAXHRPAQ--RXPXXPXXXRXXNXXPXPXPAAXRTPG 564
P P P P R P P P + G
Sbjct: 331 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Score = 31.9 bits (69), Expect = 0.95
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 262 PXXXPXPPXXPXXXXXPQAPPPTPXXXXPPPXXP 363
P P PP P P PPP P PP P
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP 324
Score = 29.9 bits (64), Expect = 3.8
Identities = 28/106 (26%), Positives = 30/106 (28%), Gaps = 6/106 (5%)
Frame = +1
Query: 262 PXXXPX-PPXXPXXXXXPQAPPPTPXXXXPPPXXPXXTXTXXXXXXPXTXKXXXRRXRXX 438
P P PP P P+ PPP PPP P T P R
Sbjct: 278 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP-PSRFG 336
Query: 439 TPPXXGPXAXHRPAQRXP---XXPXXXRXXNXXP--XPXPAAXRTP 561
P G P R P P R + P P P R P
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXP 1220
P P GPP PP PP R P R P+ P P P
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
Score = 29.5 bits (63), Expect = 5.1
Identities = 31/134 (23%), Positives = 32/134 (23%), Gaps = 4/134 (2%)
Frame = +2
Query: 278 PPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPPGXAXXXXXXXXXRPHPXXA 457
PP P P PP P P R PP PP P
Sbjct: 271 PPVPPPPPSVTPMPPPMP---PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 327
Query: 458 XPXPTXXHNAXRXXXXXXAHXTXXPXPAPRHXGHRGXXTPP----TXXXRXPXPXPHNAR 625
P P R P P R+ G PP P P P
Sbjct: 328 PPPP-----PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Query: 626 XPXKGXRQXPXPXP 667
P G P P P
Sbjct: 383 APPSGHGMIPPPPP 396
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 1089 PRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXP 1220
P PPP P P PP P R S PP P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
Score = 29.1 bits (62), Expect = 6.7
Identities = 31/126 (24%), Positives = 32/126 (25%), Gaps = 4/126 (3%)
Frame = +2
Query: 368 PPRXXXXPXPPGXAXXXXXXXXXRPHPXXAXPXPTXXHNAXRXXXXXXAHXTXXPXPAPR 547
PP P PP P P P R P P R
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
Query: 548 HX--GHRGXXTPPTXXXRXPX--PXPHNARXPXKGXRQXPXPXPEARAXPXXPXXXXPAX 715
G G PP R P P P R P G P P P + P P
Sbjct: 335 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP---SRPPAPPSGHGMI 391
Query: 716 RRPRPP 733
P PP
Sbjct: 392 PPPPPP 397
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.10
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 244 PXAXRGPXXXPXPPXXPXXXXXPQAPPPTPXXXXPPPXXP 363
P GP P P P P PPP P PPP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 8.9
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = +2
Query: 254 GGAPXXXXPPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPPGXAXXXXXXXX 433
GG P PPP P P PP P P PP P PPG
Sbjct: 711 GGPP----PPPGLPPITGGP--PPPPPPGGLPPITGGPPP-----PPPPGGLPPISGGPP 759
Query: 434 XRPHPXXAXPXP 469
P P P P
Sbjct: 760 PPPPPPGGCPPP 771
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 1/58 (1%)
Frame = +2
Query: 230 GXPXAXXXGGAPXXXX-PPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPP 400
G P GG P PPP P P PP P PP P P
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.10
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 244 PXAXRGPXXXPXPPXXPXXXXXPQAPPPTPXXXXPPPXXP 363
P GP P P P P PPP P PPP P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 8.9
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = +2
Query: 254 GGAPXXXXPPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPPGXAXXXXXXXX 433
GG P PPP P P PP P P PP P PPG
Sbjct: 711 GGPP----PPPGLPPITGGP--PPPPPPGGLPPITGGPPP-----PPPPGGLPPISGGPP 759
Query: 434 XRPHPXXAXPXP 469
P P P P
Sbjct: 760 PPPPPPGGCPPP 771
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 1/58 (1%)
Frame = +2
Query: 230 GXPXAXXXGGAPXXXX-PPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPP 400
G P GG P PPP P P PP P PP P P
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.10
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 244 PXAXRGPXXXPXPPXXPXXXXXPQAPPPTPXXXXPPPXXP 363
P GP P P P P PPP P PPP P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 28.7 bits (61), Expect = 8.9
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = +2
Query: 254 GGAPXXXXPPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPPGXAXXXXXXXX 433
GG P PPP P P PP P P PP P PPG
Sbjct: 294 GGPP----PPPGLPPITGGP--PPPPPPGGLPPITGGPPP-----PPPPGGLPPISGGPP 342
Query: 434 XRPHPXXAXPXP 469
P P P P
Sbjct: 343 PPPPPPGGCPPP 354
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 1/58 (1%)
Frame = +2
Query: 230 GXPXAXXXGGAPXXXX-PPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPP 400
G P GG P PPP P P PP P PP P P
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 34.3 bits (75), Expect = 0.18
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G AGG + A G GGA G G GGG +G G G
Sbjct: 506 GGGHVASAGGGISAMTGAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGRGGGRG 558
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
GAG G GG G + GGAG G GGG G G G
Sbjct: 499 GAGAGGGGGGHVASAGGGISAMTGAGGEAPGGGAG---GRGGGAHGGAGRGGG 548
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 34.3 bits (75), Expect = 0.18
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G AGG + A G GGA G G GGG +G G G
Sbjct: 506 GGGHVASAGGGISAMTGAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGRGGGRG 558
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
GAG G GG G + GGAG G GGG G G G
Sbjct: 499 GAGAGGGGGGHVASAGGGISAMTGAGGEAPGGGAG---GRGGGAHGGAGRGGG 548
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 33.9 bits (74), Expect = 0.24
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSX--RAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G AGG G + RA G GGAGG G GGG G G G
Sbjct: 322 GGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGG 376
Score = 32.7 bits (71), Expect = 0.55
Identities = 15/53 (28%), Positives = 18/53 (33%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXPAP 1226
P P PPP P PP PP + P + +P P P P
Sbjct: 201 PGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGP 253
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -2
Query: 362 GXXGGGXXXXGVGGGAWGXLXXXGXXGGXGXXXGPRXAXGP 240
G G G G GGG G G G G P+ A P
Sbjct: 353 GAGGAGGYSGGGGGGGGGAAAGGGYNAGGGGGGAPQAAPAP 393
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.41
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G G GG GG G GGG G G G
Sbjct: 119 GGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCG 171
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRG 1088
G G G GG G G GG GG G GGG G
Sbjct: 142 GGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCG 187
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXG 1073
G G G GG G G GG GG G GGG G G
Sbjct: 126 GGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 176
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G GG G G GG GG G GGG G G G
Sbjct: 127 GGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 179
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXG 1073
G G G GG G G GG GG G GGG G G
Sbjct: 134 GGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGG 184
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G G GG GG G G G G G G
Sbjct: 137 GGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGG 189
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G G GG G G GGG G G G
Sbjct: 135 GGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCG 187
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRG 1088
G G G GG G G GG GG G GGG G
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGG 107
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G G GG GG G GG G G G
Sbjct: 130 GGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGG 182
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 33.1 bits (72), Expect = 0.41
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXG 1073
G G G +GG G S + G S GG GG G G G G G
Sbjct: 790 GGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGG 840
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.55
Identities = 31/118 (26%), Positives = 31/118 (26%)
Frame = -1
Query: 615 CGXGXGXRXXXVGGVXXPRCPXCRGAGXGXXVXXAXXXXXXRXALCXXVGXGXAXXGWGR 436
CG G G GG P P G G G A C G G G G
Sbjct: 34 CGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGG-GCGGGGGGCGG 92
Query: 435 XXXXXXXXLAXPGGXGXXXXRGGXRXXXXGXXXXXGRGGXLGXXXXXGXAGGGXXXXG 262
GG G GG G G GG G G GG G
Sbjct: 93 GGGGCGGGGGCGGGGGGCG--GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCG 148
Score = 31.9 bits (69), Expect = 0.95
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G G GG GG G GGG G G G
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCG 132
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGX--XGXGGGPRGXXXXGXG 1067
G G G GG G S G GG GG G GGG G G G
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGG 179
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G S G GG G G GGG G G G
Sbjct: 128 GGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXG 1073
G G G GG G G GG GG G GGG G G
Sbjct: 87 GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 137
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G G GG G G GGG G G G
Sbjct: 96 GCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCG 148
Score = 28.7 bits (61), Expect = 8.9
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G A G GG GG G GGG G G G
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGG--GCGGGGGGCGGGGGGCGGGGGCGGG 106
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 362 GXXGGGXXXXGVGGGAWGXLXXXGXXGGXGXXXGPRXAXG 243
G GGG G GGG G G GG G G G
Sbjct: 109 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCG 148
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -2
Query: 365 CGXXGGGXXXXGVGGGAWGXLXXXGXXGGXGXXXGPRXAXG 243
CG GGG G GGG G G GG G P G
Sbjct: 155 CGGGGGGGCGGGGGGGCGG-----GSSGGGGYAVAPSGGGG 190
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.55
Identities = 31/118 (26%), Positives = 31/118 (26%)
Frame = -1
Query: 615 CGXGXGXRXXXVGGVXXPRCPXCRGAGXGXXVXXAXXXXXXRXALCXXVGXGXAXXGWGR 436
CG G G GG P P G G G A C G G G G
Sbjct: 34 CGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGG-GCGGGGGGCGG 92
Query: 435 XXXXXXXXLAXPGGXGXXXXRGGXRXXXXGXXXXXGRGGXLGXXXXXGXAGGGXXXXG 262
GG G GG G G GG G G GG G
Sbjct: 93 GGGGCGGGGGCGGGGGGCG--GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCG 148
Score = 31.9 bits (69), Expect = 0.95
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G G GG GG G GGG G G G
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCG 132
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGX--XGXGGGPRGXXXXGXG 1067
G G G GG G S G GG GG G GGG G G G
Sbjct: 125 GGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGG 179
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G S G GG G G GGG G G G
Sbjct: 128 GGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGG 180
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXG 1073
G G G GG G G GG GG G GGG G G
Sbjct: 87 GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 137
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G G GG G G GGG G G G
Sbjct: 96 GCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCG 148
Score = 28.7 bits (61), Expect = 8.9
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G A G GG GG G GGG G G G
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGG--GCGGGGGGCGGGGGGCGGGGGCGGG 106
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 362 GXXGGGXXXXGVGGGAWGXLXXXGXXGGXGXXXGPRXAXG 243
G GGG G GGG G G GG G G G
Sbjct: 109 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCG 148
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -2
Query: 365 CGXXGGGXXXXGVGGGAWGXLXXXGXXGGXGXXXGPRXAXG 243
CG GGG G GGG G G GG G P G
Sbjct: 155 CGGGGGGGCGGGGGGGCGG-----GSSGGGGYAVAPSGGGG 190
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein 34
protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.95
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXP 1220
P P P+GPP P PP PP P +P P P P
Sbjct: 142 PPPCKPCPQGPP-GPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGP 191
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.95
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXP 1220
P P P+GPP P PP PP P +P P P P
Sbjct: 142 PPPWKPCPQGPP-GPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPKGP 191
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular collagen
RAM-4 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.95
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXP 1220
P P P+GPP P PP PP P +P P P P
Sbjct: 142 PPPCKPCPQGPP-GPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGP 191
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +3
Query: 1095 GPPPXPXXPP---APPXXERXPXXXARXDXXRSPTXEPPAXPXXPAP 1226
GPPP P PP APP P P PP P P P
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 262 PXXXPXPPXXPXXXXXPQAPPPTPXXXXPPPXXP 363
P P PP P P PPP P PPP P
Sbjct: 53 PQFCPPPPMCPP----PPPPPPPPMCPPPPPPMP 82
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPP 1133
P P P PPP P PP PP
Sbjct: 58 PPPMCPPPPPPPPPPMCPPPPP 79
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G+ G GG G G GGG G G G
Sbjct: 126 GGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGG 178
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G +GG G + G GG G G GGG G G G
Sbjct: 75 GRGGYGGSGGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGG 127
Score = 29.5 bits (63), Expect = 5.1
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = -2
Query: 362 GXXGGGXXXXGVGGGAW--GXLXXXGXXGGXGXXXGPRXAXG 243
G GGG G+GGG + G G GG G GP G
Sbjct: 199 GMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYG 240
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G G GG GG G GP G G G
Sbjct: 182 GYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYG 234
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +2
Query: 257 GAPXXXXPPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXP 397
G P PPP P P PRP P + P+ P P
Sbjct: 90 GRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQPEP 136
Score = 30.3 bits (65), Expect = 2.9
Identities = 23/95 (24%), Positives = 27/95 (28%)
Frame = +3
Query: 108 GGXXGGXXXGXXPRXXXXXAXXXXGEGGGAGXXXXXITARXXXHXPXXXAGPPXXXXPPX 287
GG GG P G GGG G R + P PP P
Sbjct: 58 GGGFGGNNYNNGPPPFDGGYNRPYGGGGGGGY------GRPQGYVPPPP--PPPTQPEPE 109
Query: 288 XXXXXQXAPGXPPDPXPRXXPXXXPAXHXDXXXXP 392
+ P P+P P P P H + P
Sbjct: 110 PEPRPEPQPEPQPEPQPEPQPEPQPEPHPEPAPEP 144
Score = 29.5 bits (63), Expect = 5.1
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +3
Query: 1089 PRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXPAP 1226
P+G P P PP P E P + + P EP P P P
Sbjct: 92 PQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQPEP-QPEP 136
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/56 (25%), Positives = 18/56 (32%)
Frame = +2
Query: 278 PPPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXXXXPXPPGXAXXXXXXXXXRPH 445
PPP P PR P+P P + P+ P P +PH
Sbjct: 101 PPPTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQPEPHPEPAPEPIVKPYNSYAQPH 156
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXPAP 1226
P P RGPPP PP +R P R R P P P P P
Sbjct: 40 PPPPWHRNRGPPPFGPPPP----WDRPPPPWRRPPWHRRPPWGLPPPPPPPEP 88
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGG 1097
G G G GG+ +G S G + GG G G GGG
Sbjct: 77 GGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGGGGGG 119
Score = 30.3 bits (65), Expect = 2.9
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXG 1073
G G G GG G + G GG GG G GGG +G G
Sbjct: 69 GNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGGGGGG 119
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -3
Query: 1210 GXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G AGG +G + G GG GG G GGG G G G
Sbjct: 36 GGAGGDILG----GLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGG 79
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 2/75 (2%)
Frame = +2
Query: 185 GXGXXXXRPXNNXXXGXPXAXXXGGAPXXXXPP--PAXPXXXXXPRXPPRPXXXXXPXXX 358
G RP N+ G P GAP P P P P RP
Sbjct: 194 GPAGQAGRPGNDGQPGAPSFGGGVGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQGGSS 253
Query: 359 XRXPPRXXXXPXPPG 403
PP P PPG
Sbjct: 254 RPGPPGPAGPPGPPG 268
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +3
Query: 1068 PXPXXXXP-RGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXP 1211
P P P PP P PP PP P R P EP P
Sbjct: 74 PLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIP 122
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +3
Query: 1068 PXPXXXXP-RGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXP 1211
P P P PP P PP PP P R P EP P
Sbjct: 296 PLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIP 344
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Frame = +1
Query: 262 PXXXPXPPXXPXXXXX--PQAPPPTPXXXXPPPXXP 363
P P PP P P PPP P PPP P
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPP 1133
P P P PPP P PP PP
Sbjct: 66 PPPPICPPPPPPPMPCPPPPPP 87
>U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical
protein F26A1.11 protein.
Length = 239
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 274 PXPPXXPXXXXXPQAPPPTPXXXXPPPXXP 363
P P P PQ PPP+ PPP P
Sbjct: 33 PPRPPRPPSPSRPQRPPPSRPQRPPPPRQP 62
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 262 PXXXPXPPXXPXXXXXPQAPPPTPXXXXPPPXXP 363
P P PP P PPPTP PPP P
Sbjct: 119 PGGVPAPPNPPRTC----CPPPTPAAPPPPPPPP 148
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 259 GPXXXPXPPXXPXXXXXPQAPPPTPXXXXPPPXXP 363
G P PP P APPP P P P P
Sbjct: 121 GVPAPPNPPRTCCPPPTPAAPPPPPPPPPPAPEAP 155
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.9 bits (64), Expect = 3.8
Identities = 42/193 (21%), Positives = 51/193 (26%), Gaps = 11/193 (5%)
Frame = +2
Query: 281 PPAXPXXXXXPRXPP--RPXXXXXPXXXXRXPP---RXXXXPXPP------GXAXXXXXX 427
PP P P PP P R PP + P PP +
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNA 92
Query: 428 XXXRPHPXXAXPXPTXXHNAXRXXXXXXAHXTXXPXPAPRHXGHRGXXTPPTXXXRXPXP 607
P P P + + P P P+ G PPT +
Sbjct: 93 SRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG--SPPPPPTGEPQDLSG 150
Query: 608 XPHNARXPXKGXRQXPXPXPEARAXPXXPXXXXPAXRRPRPPXPXXXTAXHRAPXPXXRR 787
+ +R P + P P P A RRP PP T P P
Sbjct: 151 EGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTP---PPPPTGEP 207
Query: 788 QXXXAXXTAXXRP 826
Q A A RP
Sbjct: 208 QDLSAEGYASRRP 220
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 29.9 bits (64), Expect = 3.8
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Frame = -1
Query: 468 GXGXAXXGWGRXXXXXXXXL-AXPGGXGXXXXRGGXRXXXXGXXXXXGRGGXLGXXXXXG 292
G G GWG PGG G GG G G+GG G G
Sbjct: 183 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQG 242
Query: 291 XAGGGXXXXG 262
G G G
Sbjct: 243 GGGWGQQGGG 252
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.9 bits (64), Expect = 3.8
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Frame = -1
Query: 468 GXGXAXXGWGRXXXXXXXXL-AXPGGXGXXXXRGGXRXXXXGXXXXXGRGGXLGXXXXXG 292
G G GWG PGG G GG G G+GG G G
Sbjct: 221 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQG 280
Query: 291 XAGGGXXXXG 262
G G G
Sbjct: 281 GGGWGQQGGG 290
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical protein
T01C3.7 protein.
Length = 352
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G G GG G R S G R GG G GGG RG G G
Sbjct: 9 GGGGGGFRGGRG-GDRGGSRGGFGGGGRGGYGG-GDRGSFGGGDRGGFRGGRG 59
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRG 1088
G G G GG G R G R G G GGG RG
Sbjct: 31 GGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRGGRGGGDRG 76
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 274 PXPPXXPXXXXXPQAPPPTPXXXXPPP 354
P PP P PPP P PPP
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPPPPP 523
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical protein
F23H12.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXPA 1223
P P P+GPP P PP P R +P P P PA
Sbjct: 144 PPPCKPCPQGPPG-PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPA 194
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXPA 1223
P P P+GPP P PP P R +P P P PA
Sbjct: 139 PPPCKPCPQGPPG-PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPA 189
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 1 (col-1) gene, complete cds. ).
Length = 296
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXPA 1223
P P P+GPP P PP P R +P P P PA
Sbjct: 139 PPPCKPCPQGPPG-PPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPA 189
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.1 bits (62), Expect = 6.7
Identities = 25/84 (29%), Positives = 28/84 (33%), Gaps = 3/84 (3%)
Frame = +1
Query: 847 TXXAPXAPPPXTXXQTPAXSTXXXXXXXASTAXGGRQGP--QA-RXPPHXXAXRGNXPPP 1017
T AP APP A GG GP QA R PP PPP
Sbjct: 595 TPQAPQAPPVQAAPAPVQAPQAPQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYSPYPPP 654
Query: 1018 XPHXEHXXAQPPQXAXNHXXXGXG 1089
+H AQ Q ++ G G
Sbjct: 655 QQQQQH-QAQQAQSQAHYGPPGGG 677
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like protein
protein.
Length = 789
Score = 29.1 bits (62), Expect = 6.7
Identities = 25/84 (29%), Positives = 28/84 (33%), Gaps = 3/84 (3%)
Frame = +1
Query: 847 TXXAPXAPPPXTXXQTPAXSTXXXXXXXASTAXGGRQGP--QA-RXPPHXXAXRGNXPPP 1017
T AP APP A GG GP QA R PP PPP
Sbjct: 595 TPQAPQAPPVQAAPAPVQAPQAPQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYSPYPPP 654
Query: 1018 XPHXEHXXAQPPQXAXNHXXXGXG 1089
+H AQ Q ++ G G
Sbjct: 655 QQQQQH-QAQQAQSQAHYGPPGGG 677
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical protein
C18D11.4 protein.
Length = 309
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGG--XXGXGGGPR-GXXXXGXG 1067
G G G GG R G R GG GG G GGG R G G G
Sbjct: 176 GGGRFGGGGGDRFNDRGSRGGDRYGGDRRGGGGGGGGDRYGGGGGDRYGGDRYGGG 231
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 8.9
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +2
Query: 599 PXPXPHNARXPXKGXRQXPXPXPEARAXPXXPXXXXPAXRRPRPPXPXXXTAXHRAPXP 775
P P P P G P P P A P P P P PP P +AP P
Sbjct: 88 PLPPPPPPASPCCG----PSPVP-APCCPPPPAPAAPCCPPPPPPTPSPLVCCKQAPVP 141
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical protein
F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 8.9
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAG-GXXGXGGGPRGXXXXG 1073
G G G GG G G GG G G G GGG RG G
Sbjct: 17 GGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGG 68
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical protein
F42G4.3a protein.
Length = 603
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +3
Query: 1095 GPPPXPXXPPAPPXXERXPXXXAR-XDXXRSPTXEPPAXPXXPAP 1226
GPPP P PP P E P + D R PA P P
Sbjct: 2 GPPPPPPPPPLLPSGEILPSRKWKTEDAPRRNNHPAPAPPKPSRP 46
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical protein
F15B9.10 protein.
Length = 373
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 1132 GGAGGXXGXGGGPRGXXXXGXG 1067
GG GG G GGG RG G G
Sbjct: 314 GGGGGGGGMGGGNRGYGYQGGG 335
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical protein
R08B4.1a protein.
Length = 1137
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -3
Query: 1219 GXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G G +GG G S S G GG G G G G G G
Sbjct: 781 GPTGSSGGGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNG 831
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical protein
F10F2.9 protein.
Length = 549
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRG 1088
G+G G +GG + G GG GG G GGG G
Sbjct: 345 GSGSNGGSGGGNTDNDNWGSNNGNSGGSWGNGGTGGSGGSGGGNWG 390
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical protein
F10F2.9 protein.
Length = 549
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = -3
Query: 1225 GAGXXGXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRG 1088
G+G G +GG + G GG GG G GGG G
Sbjct: 345 GSGSNGGSGGGNTDNDNWGSNNGNSGGSWGNGGTGGSGGSGGGNWG 390
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXPXXXA--RXDXXRSPTXEPPAXPXXPAP 1226
P P P GPP PP P P A R T PP+ P P
Sbjct: 812 PYPGGPVPPGPPQNRMPPPPPAQGAPSPSGAAGSNGKQPRYGTPAPPSRASAPTP 866
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical protein
F41F3.8 protein.
Length = 118
Score = 28.7 bits (61), Expect = 8.9
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 1068 PXPXXXXPRGPPPXPXXPPAPPXXERXP 1151
P P P PP P PP PP E P
Sbjct: 39 PRPRVAAPPFAPPPPPSPPLPPKCECPP 66
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.7 bits (61), Expect = 8.9
Identities = 19/69 (27%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Frame = +2
Query: 209 PXNNXXXGXPXAXXXGGAPXXXXP--PPAXPXXXXXPRXPPRPXXXXXPXXXXRXPPRXX 382
P + G P A P P PP P P P RP P
Sbjct: 167 PGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGAPGEPGRPGDDAPSEPLIPGEPGPQ 226
Query: 383 XXPXPPGXA 409
P PPG A
Sbjct: 227 GPPGPPGQA 235
>U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical protein
R02F2.5 protein.
Length = 223
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +3
Query: 1089 PRGPPPXPXXPPAPPXXERXPXXXARXDXXRSPTXEPPAXPXXPAP 1226
P+G P P APP + P R EPP P+P
Sbjct: 45 PQGIPQGPPPAYAPPAAPKAPEKVVEPKNRRVTIAEPPERVAEPSP 90
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -3
Query: 1210 GXAGGSXVGLRSXSXRAXXXGXRSXXGGAGGXXGXGGGPRGXXXXGXG 1067
G AGG +G + G GG GG G GGG G G G
Sbjct: 36 GGAGGDILG----GLASNFFGGGGGGGGGGGGGGFGGGNGGFGGGGGG 79
>AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical
protein Y37H2A.1 protein.
Length = 477
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 905 ARPXXHXXRXAPPXXAXRXXKPANXRTPXPXEGT 1006
A P H R PP R P N P P GT
Sbjct: 87 AAPTMHHSRPPPPPLDRRPMSPQNASRPLPVRGT 120
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 274 PXPPXXPXXXXXPQAPPPTPXXXXPPP 354
P PP P QAPPP P PPP
Sbjct: 69 PPPPPPPLISILQQAPPPPP--PPPPP 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.137 0.470
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,207,095
Number of Sequences: 27780
Number of extensions: 308927
Number of successful extensions: 3990
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2954
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3391198850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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