Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H07
         (871 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2DLX5 Cluster: Surface antigen BspA-like; n=1; Trichom...    35   3.1  
UniRef50_Q22D28 Cluster: Cation channel family protein; n=1; Tet...    33   7.1  
UniRef50_Q972H8 Cluster: Putative uncharacterized protein ST1152...    33   7.1  
UniRef50_UPI00006CB795 Cluster: hypothetical protein TTHERM_0034...    33   9.4  
UniRef50_Q54TI2 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  

>UniRef50_A2DLX5 Cluster: Surface antigen BspA-like; n=1;
           Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
           - Trichomonas vaginalis G3
          Length = 544

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +2

Query: 386 KCFKNVDVXQKI-YSAILKTQRLF*LIFLHTFSNAIYFVSANLLFSKQNIFRFSKVT--- 553
           KCF N  + QKI +++  K  +    +F +  S        NL F  QN+F F+K+T   
Sbjct: 306 KCFSNCRILQKIDFTSTKKLTKFEDKLFYNCNSLETIIFPENLYFVGQNVFSFTKITNIK 365

Query: 554 INLLCIMISAY 586
           +NL  I I A+
Sbjct: 366 LNLQEIDILAF 376


>UniRef50_Q22D28 Cluster: Cation channel family protein; n=1;
           Tetrahymena thermophila SB210|Rep: Cation channel family
           protein - Tetrahymena thermophila SB210
          Length = 1159

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +2

Query: 404 DVXQKIYSAILKTQRLF*LIFLHTFSNAIY-FVSANLLFSKQNIFRFSKVTINLLCIM 574
           DV +++YS ILK Q+LF L F  TF   +Y +V        + +F+ ++ + NL  I+
Sbjct: 462 DVLKEMYSNILKKQKLFNLNFSETFITNLYKYVKEKKYSVDEYLFKENEKSENLFFIL 519


>UniRef50_Q972H8 Cluster: Putative uncharacterized protein ST1152;
           n=3; Sulfolobus|Rep: Putative uncharacterized protein
           ST1152 - Sulfolobus tokodaii
          Length = 402

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = -3

Query: 569 YIEDLWLLWKNEIYFVLK-ITNLH*QNRLRSKMCAKKLIKIIFGSLKLLNRFF 414
           Y +  WL    +IYF+LK + N+    + ++K+  KKLIKI+   L  L  F+
Sbjct: 178 YTDPEWLKKTYDIYFLLKDLENIRVGKKEKTKVSDKKLIKILLWKLYELYTFY 230


>UniRef50_UPI00006CB795 Cluster: hypothetical protein
           TTHERM_00348920; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00348920 - Tetrahymena
           thermophila SB210
          Length = 1175

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +3

Query: 231 NERXXTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDNASSASTVEVLDDK*SVLKMWMC 410
           N     L++  +  NS+K+  D +   I+ENK K  D+ +S+++ +       VLK ++ 
Sbjct: 605 NPSQYNLQSQRNTSNSNKEKLDSTEQQIEENKLKGKDHRNSSASPQQNSRNKEVLKKFLT 664

Query: 411 XKKSIQ 428
             K I+
Sbjct: 665 KTKQIK 670


>UniRef50_Q54TI2 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 548

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 258 DVSDVNSSKDAQDESRNSIDENKEKDHDNASSASTVEVLDDK 383
           D  +   S+D +D SR+S D+ ++KDH ++S        DDK
Sbjct: 426 DSREYRESRDHRDHSRDSRDQYRDKDHRDSSDGRDHRNRDDK 467


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,795,361
Number of Sequences: 1657284
Number of extensions: 9076969
Number of successful extensions: 25953
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25820
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)