Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H06
         (878 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    27   0.15 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   5.5  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   7.3  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   9.7  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +2

Query: 323 PALAPRAPRTLFTIASPXEFRLIFAENNIKLMYKRHGLALTLGDSDINGRIAFGDSKDK 499
           P    + PRT F+ A     +  FAEN      +R  L+  LG ++   +I F + + K
Sbjct: 224 PTAEEKRPRTAFSGAQLARLKHEFAENRYLTERRRQQLSAELGLNEAQIKIWFQNKRAK 282


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 554 YFKILNTKRNQYLTLGVNTNGHGGHMAY 637
           Y++I N  RNQ   +  +T+G  G  AY
Sbjct: 906 YYEICNRIRNQRWIVNRDTSGATGPFAY 933


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +3

Query: 765 TGHITAGPSDTXAASWGSPXHYAWGH 842
           +G + +  +D     WG+   Y WG+
Sbjct: 15  SGALVSATTDKVVCYWGTWSTYRWGN 40


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +3

Query: 297 KMNCMEYAYQLWLQGLQGHCSRLLPRLSSDLYSQKTT 407
           K+N  E   Q+W +  +  C + L +  +   S+ TT
Sbjct: 163 KINLPESRVQVWFKNRRAKCRQQLQQQQNKSASRTTT 199


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 650 VDSFRTQWYLQPAKYDNDVLFFIYXREYSEAL 745
           +D+ R  W    AKYD D    +Y ++Y + +
Sbjct: 94  IDNKRDWWNELEAKYDKD---GVYRQKYKDVI 122


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 656 SFRTQWYLQPAKYDNDVLFFIYXREY 733
           ++R +W    AKYD D    IY ++Y
Sbjct: 106 NYRNEWNQLVAKYDPD---GIYRKQY 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,237
Number of Sequences: 336
Number of extensions: 2589
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)