BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H06
(878 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022820-1|AAY55236.1| 664|Drosophila melanogaster IP13211p pro... 31 1.6
AE014297-4592|AAF57045.2| 666|Drosophila melanogaster CG15534-P... 31 1.6
X55178-1|CAA38963.1| 149|Drosophila melanogaster cystatin-like ... 29 8.5
AY113633-1|AAM29638.1| 126|Drosophila melanogaster RH72992p pro... 29 8.5
AY070635-1|AAL48106.1| 126|Drosophila melanogaster RH01620p pro... 29 8.5
AE014297-1867|AAF55073.2| 126|Drosophila melanogaster CG8050-PA... 29 8.5
>BT022820-1|AAY55236.1| 664|Drosophila melanogaster IP13211p
protein.
Length = 664
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 446 LGDSDINGRIAFGDSKDKTSPRVSWMFIPLWENDKVYFKILNTKRNQYLTLG--VNTNGH 619
LG+ + + FG+ + +S RV W++ +W ++ K L + + + G +
Sbjct: 328 LGNHEPHPANVFGNDEIPSSLRVDWLYEHVW---SLWSKWLPAEAEETVLRGGYYTASPS 384
Query: 620 GGHMAYGVNSVDSFRTQWYL 679
GH +NS+D + W+L
Sbjct: 385 KGHRIVALNSMDCYLYNWWL 404
>AE014297-4592|AAF57045.2| 666|Drosophila melanogaster CG15534-PA
protein.
Length = 666
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 446 LGDSDINGRIAFGDSKDKTSPRVSWMFIPLWENDKVYFKILNTKRNQYLTLG--VNTNGH 619
LG+ + + FG+ + +S RV W++ +W ++ K L + + + G +
Sbjct: 330 LGNHEPHPANVFGNDEIPSSLRVDWLYEHVW---SLWSKWLPAEAEETVLRGGYYTASPS 386
Query: 620 GGHMAYGVNSVDSFRTQWYL 679
GH +NS+D + W+L
Sbjct: 387 KGHRIVALNSMDCYLYNWWL 406
>X55178-1|CAA38963.1| 149|Drosophila melanogaster cystatin-like
protein protein.
Length = 149
Score = 29.1 bits (62), Expect = 8.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 391 YKSELXRGSNREQCPWSPWSQSW 323
Y+ EL GS+++QC W+Q W
Sbjct: 104 YEVELDNGSDKKQCTVKIWTQPW 126
>AY113633-1|AAM29638.1| 126|Drosophila melanogaster RH72992p
protein.
Length = 126
Score = 29.1 bits (62), Expect = 8.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 391 YKSELXRGSNREQCPWSPWSQSW 323
Y+ EL GS+++QC W+Q W
Sbjct: 81 YEVELDNGSDKKQCTVKIWTQPW 103
>AY070635-1|AAL48106.1| 126|Drosophila melanogaster RH01620p
protein.
Length = 126
Score = 29.1 bits (62), Expect = 8.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 391 YKSELXRGSNREQCPWSPWSQSW 323
Y+ EL GS+++QC W+Q W
Sbjct: 81 YEVELDNGSDKKQCTVKIWTQPW 103
>AE014297-1867|AAF55073.2| 126|Drosophila melanogaster CG8050-PA
protein.
Length = 126
Score = 29.1 bits (62), Expect = 8.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 391 YKSELXRGSNREQCPWSPWSQSW 323
Y+ EL GS+++QC W+Q W
Sbjct: 81 YEVELDNGSDKKQCTVKIWTQPW 103
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,305,584
Number of Sequences: 53049
Number of extensions: 509516
Number of successful extensions: 1284
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -