Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H06
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AC024794-5|AAK68500.1|  320|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
           protein C44H9.4 protein.
          Length = 1099

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2

Query: 548 KVYFKILNTKRNQYLTLGVNTNGHGGH 628
           + YF++L+ + N+Y+ +  + N HG H
Sbjct: 156 RAYFRVLSAEDNKYILIACHANLHGLH 182


>AC024794-5|AAK68500.1|  320|Caenorhabditis elegans Hypothetical
           protein Y48G1BM.8 protein.
          Length = 320

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 407 IKLMYKRHGLALTLGDSD-INGRIAFGDSKDKTSPRVSWMFIPL 535
           +KL+  RHG   T  DSD        G S D+T P V+ +FI L
Sbjct: 41  VKLLPYRHGSNTTSSDSDSFILNSGSGSSDDETPPPVAPIFISL 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,741,812
Number of Sequences: 27780
Number of extensions: 255237
Number of successful extensions: 595
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)