Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H06
         (878 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g56690.1 68418.m07076 F-box family protein contains F-box dom...    31   1.0  
At5g63450.1 68418.m07965 cytochrome P450, putative                     31   1.3  
At3g48520.1 68416.m05296 cytochrome P450 family protein similar ...    28   9.5  
At1g07010.1 68414.m00746 calcineurin-like phosphoesterase family...    28   9.5  

>At5g56690.1 68418.m07076 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 402

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = +2

Query: 542 NDKVYFKILNTKRNQYLTLGVNTNGHGGHMAYGVNSVDSFRTQWYLQPAKYDNDVLFFIY 721
           N K ++K    K  +YL +  + N  G      +NS+++FR +WY    + D D L  I+
Sbjct: 333 NSKSFYK---EKIGEYLPVSWSKN-QGSVPKCFLNSLETFRVKWYYSEEQEDRDFLSLIF 388


>At5g63450.1 68418.m07965 cytochrome P450, putative
          Length = 510

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 491 KDKTSPRVSWMFIPLWENDKVYFKILNTKRNQ 586
           +D TS  ++W+F  L +ND V  KIL+  RN+
Sbjct: 307 RDTTSAAMTWLFWLLSQNDDVETKILDELRNK 338


>At3g48520.1 68416.m05296 cytochrome P450 family protein similar to
           Cytochrome P450 94A1  (P450-dependent fatty acid
           omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains
           Pfam profile: PF00067 cytochrome P450
          Length = 506

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 491 KDKTSPRVSWMFIPLWENDKVYFKIL 568
           +D TS  ++W+F  L END V  KIL
Sbjct: 305 RDTTSAAMTWLFWLLTENDDVERKIL 330


>At1g07010.1 68414.m00746 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 389

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +2

Query: 617 HGG----HMAYGVNSVDSFRTQWYLQPAKY-DNDVLFFIYXREYSEAL 745
           HGG    H+AYG+  ++   + W   P  Y D+  + FI  R Y   +
Sbjct: 242 HGGLLPHHVAYGIERINREVSTWMRSPTNYEDSPQMPFIATRGYDSVV 289


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,026,555
Number of Sequences: 28952
Number of extensions: 242819
Number of successful extensions: 608
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2067932800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)