Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H05
         (1275 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.                    33   2.9  
U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome ...    33   2.9  
BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrom...    33   2.9  
BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.          33   2.9  
AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrom...    33   2.9  
AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens ...    32   5.1  

>U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.
          Length = 502

 Score = 32.7 bits (71), Expect = 2.9
 Identities = 19/64 (29%), Positives = 24/64 (37%)
 Frame = -1

Query: 195 PPGCXVXAXPPXPXXTRSXRLXXXXAXSSXLXLPXPPPPXTTXXPXPXNGGXPGXSXQGX 16
           PPG      PP P   RS  L      +    +P PPPP     P P +G  P       
Sbjct: 361 PPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP---PPPPPSSGNGPAPPPLPP 417

Query: 15  GVLP 4
            ++P
Sbjct: 418 ALVP 421


>U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           protein protein.
          Length = 502

 Score = 32.7 bits (71), Expect = 2.9
 Identities = 19/64 (29%), Positives = 24/64 (37%)
 Frame = -1

Query: 195 PPGCXVXAXPPXPXXTRSXRLXXXXAXSSXLXLPXPPPPXTTXXPXPXNGGXPGXSXQGX 16
           PPG      PP P   RS  L      +    +P PPPP     P P +G  P       
Sbjct: 361 PPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP---PPPPPSSGNGPAPPPLPP 417

Query: 15  GVLP 4
            ++P
Sbjct: 418 ALVP 421


>BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           (eczema-thrombocytopenia) protein.
          Length = 502

 Score = 32.7 bits (71), Expect = 2.9
 Identities = 19/64 (29%), Positives = 24/64 (37%)
 Frame = -1

Query: 195 PPGCXVXAXPPXPXXTRSXRLXXXXAXSSXLXLPXPPPPXTTXXPXPXNGGXPGXSXQGX 16
           PPG      PP P   RS  L      +    +P PPPP     P P +G  P       
Sbjct: 361 PPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP---PPPPPSSGNGPAPPPLPP 417

Query: 15  GVLP 4
            ++P
Sbjct: 418 ALVP 421


>BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.
          Length = 514

 Score = 32.7 bits (71), Expect = 2.9
 Identities = 19/64 (29%), Positives = 24/64 (37%)
 Frame = -1

Query: 195 PPGCXVXAXPPXPXXTRSXRLXXXXAXSSXLXLPXPPPPXTTXXPXPXNGGXPGXSXQGX 16
           PPG      PP P   RS  L      +    +P PPPP     P P +G  P       
Sbjct: 373 PPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP---PPPPPSSGNGPAPPPLPP 429

Query: 15  GVLP 4
            ++P
Sbjct: 430 ALVP 433


>AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrome
           protein protein.
          Length = 502

 Score = 32.7 bits (71), Expect = 2.9
 Identities = 19/64 (29%), Positives = 24/64 (37%)
 Frame = -1

Query: 195 PPGCXVXAXPPXPXXTRSXRLXXXXAXSSXLXLPXPPPPXTTXXPXPXNGGXPGXSXQGX 16
           PPG      PP P   RS  L      +    +P PPPP     P P +G  P       
Sbjct: 361 PPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP---PPPPPSSGNGPAPPPLPP 417

Query: 15  GVLP 4
            ++P
Sbjct: 418 ALVP 421


>AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45135 fis, clone BRAWH3038252, highly  similar
           to Formin 1 isoform IV. ).
          Length = 844

 Score = 31.9 bits (69), Expect = 5.1
 Identities = 21/64 (32%), Positives = 23/64 (35%)
 Frame = -1

Query: 195 PPGCXVXAXPPXPXXTRSXRLXXXXAXSSXLXLPXPPPPXTTXXPXPXNGGXPGXSXQGX 16
           PP   V A PP P              SS    P PPPP     P P N G P  +    
Sbjct: 317 PPMPPVSAGPPLPPPPPPP--PPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPP 374

Query: 15  GVLP 4
           G+ P
Sbjct: 375 GLAP 378


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,914,074
Number of Sequences: 237096
Number of extensions: 621278
Number of successful extensions: 2868
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2549
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18275348360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)