Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H04
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0844 + 28139996-28140736                                         31   1.2  
12_02_0580 + 20776820-20777247,20777341-20778109,20779280-207794...    30   2.1  
02_05_0426 - 28881671-28881753,28882130-28882621,28882802-288828...    30   2.1  
02_02_0372 + 9522751-9522964,9523043-9523255,9523471-9523555,952...    30   2.8  
02_04_0224 - 21059328-21059888,21060388-21060462,21060715-210607...    29   5.0  
06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137           29   6.6  

>03_05_0844 + 28139996-28140736
          Length = 246

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -1

Query: 751 DHXNTFXGSLPSAGSFRATQSWSRRWAAVAGGSRCCPWALLLGA 620
           DH +   G    AG+   + S +RRWA  AGG R  P   L  A
Sbjct: 28  DHADYSGGRRMEAGARWCSDSLARRWAKAAGGVRAPPTPTLAKA 71


>12_02_0580 +
           20776820-20777247,20777341-20778109,20779280-20779447,
           20779877-20780236
          Length = 574

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 724 LPSAGSFRATQSWSRRWAAVAGGSRCCPWALLLGA 620
           LPSAG    T   SRRW  + G + C  +A+ LG+
Sbjct: 36  LPSAGDVARTTVLSRRWRHLCGIAPCLRFAVGLGS 70


>02_05_0426 -
           28881671-28881753,28882130-28882621,28882802-28882864,
           28883251-28883440,28883534-28883642,28883952-28884363,
           28884967-28885196,28885294-28885403
          Length = 562

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -2

Query: 726 PFRQQVVSEQRSPGLVVGQLLLEVAAAALGRSYWVHRHYSGTXG 595
           P   Q+V++ + P  VVG     +AAA+ G S+  H  Y    G
Sbjct: 166 PVETQLVAQSQPPSSVVGSAAAPLAAASNGSSFQNHSLYPAIAG 209


>02_02_0372 +
           9522751-9522964,9523043-9523255,9523471-9523555,
           9524373-9524448,9524974-9525150,9525473-9525566,
           9526357-9526466,9526568-9526657,9526752-9526832,
           9528468-9529277,9530777-9530896
          Length = 689

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 614 CRCTQ*ERPRAAAATSSNSCP 676
           CRC+    P AAA+ SS++CP
Sbjct: 22  CRCSSSSSPAAAASASSSACP 42


>02_04_0224 -
           21059328-21059888,21060388-21060462,21060715-21060798,
           21060866-21061183,21061511-21061722,21061766-21062030
          Length = 504

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 347 LTEPPYYLKSPGL-TGDAKLVEIGGPPYLVPQVKRD 451
           + +PPY +++ G  +G  KL++    PY VP  KRD
Sbjct: 324 ICDPPYGVRAGGRKSGGRKLIKGTVAPYTVPDEKRD 359


>06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137
          Length = 542

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 438 CGTKYGGPPISTSLASPVNPGD 373
           C  ++GGPP  +S+A PV  G+
Sbjct: 200 CQVRWGGPPSKSSIADPVLTGE 221


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,310,132
Number of Sequences: 37544
Number of extensions: 450203
Number of successful extensions: 1327
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)