Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_H03
(847 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017188-1|AAH17188.1| 837|Homo sapiens TEL2, telomere maintena... 31 4.0
AL031705-4|CAC37283.1| 837|Homo sapiens protein ( Human DNA seq... 31 4.0
AE006467-10|AAK61284.1| 837|Homo sapiens KIAA0683 protein. 31 4.0
AB014583-1|BAA31658.3| 844|Homo sapiens KIAA0683 protein protein. 31 4.0
BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein. 31 6.9
BC108650-1|AAI08651.1| 471|Homo sapiens NBN protein protein. 31 6.9
AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndr... 31 6.9
AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein. 31 6.9
AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein. 31 6.9
AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory p... 31 6.9
AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein. 31 6.9
AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein. 31 6.9
>BC017188-1|AAH17188.1| 837|Homo sapiens TEL2, telomere maintenance
2, homolog (S. cerevisiae) protein.
Length = 837
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 348 SPAWLRTERHQRESEKWSA---DGAG*QCF*SLLENTEPSLGCEFR 476
SPAWL H R E W++ +G Q F L+E E + G FR
Sbjct: 71 SPAWLELLPHGRLEELWASFFLEGPADQAFLVLMETIEGAAGPSFR 116
>AL031705-4|CAC37283.1| 837|Homo sapiens protein ( Human DNA
sequence from clone LA16c-305C8 on chromosome 16. ).
Length = 837
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 348 SPAWLRTERHQRESEKWSA---DGAG*QCF*SLLENTEPSLGCEFR 476
SPAWL H R E W++ +G Q F L+E E + G FR
Sbjct: 71 SPAWLELLPHGRLEELWASFFLEGPADQAFLVLMETIEGAAGPSFR 116
>AE006467-10|AAK61284.1| 837|Homo sapiens KIAA0683 protein.
Length = 837
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 348 SPAWLRTERHQRESEKWSA---DGAG*QCF*SLLENTEPSLGCEFR 476
SPAWL H R E W++ +G Q F L+E E + G FR
Sbjct: 71 SPAWLELLPHGRLEELWASFFLEGPADQAFLVLMETIEGAAGPSFR 116
>AB014583-1|BAA31658.3| 844|Homo sapiens KIAA0683 protein protein.
Length = 844
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 348 SPAWLRTERHQRESEKWSA---DGAG*QCF*SLLENTEPSLGCEFR 476
SPAWL H R E W++ +G Q F L+E E + G FR
Sbjct: 78 SPAWLELLPHGRLEELWASFFLEGPADQAFLVLMETIEGAAGPSFR 123
>BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +3
Query: 186 SPYVRESMLDTHSLWSNLANEMQHLDDMMKELS-LKFPSHYKRRTRGRRQ-----VSDIY 347
+P V+ES + + S ++N + + +LS K PS K + R +Q + + +
Sbjct: 400 APTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYF 459
Query: 348 SPAWLRTERHQRESEKWSADGAG*QCF*SLLENTEPS 458
P+ + ER + E S A + SLLE T+P+
Sbjct: 460 QPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPA 496
>BC108650-1|AAI08651.1| 471|Homo sapiens NBN protein protein.
Length = 471
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +3
Query: 186 SPYVRESMLDTHSLWSNLANEMQHLDDMMKELS-LKFPSHYKRRTRGRRQ-----VSDIY 347
+P V+ES + + S ++N + + +LS K PS K + R +Q + + +
Sbjct: 318 APTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYF 377
Query: 348 SPAWLRTERHQRESEKWSADGAG*QCF*SLLENTEPS 458
P+ + ER + E S A + SLLE T+P+
Sbjct: 378 QPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPA 414
>AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndrome
1 (nibrin) protein.
Length = 754
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +3
Query: 186 SPYVRESMLDTHSLWSNLANEMQHLDDMMKELS-LKFPSHYKRRTRGRRQ-----VSDIY 347
+P V+ES + + S ++N + + +LS K PS K + R +Q + + +
Sbjct: 400 APTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYF 459
Query: 348 SPAWLRTERHQRESEKWSADGAG*QCF*SLLENTEPS 458
P+ + ER + E S A + SLLE T+P+
Sbjct: 460 QPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPA 496
>AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein.
Length = 754
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +3
Query: 186 SPYVRESMLDTHSLWSNLANEMQHLDDMMKELS-LKFPSHYKRRTRGRRQ-----VSDIY 347
+P V+ES + + S ++N + + +LS K PS K + R +Q + + +
Sbjct: 400 APTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYF 459
Query: 348 SPAWLRTERHQRESEKWSADGAG*QCF*SLLENTEPS 458
P+ + ER + E S A + SLLE T+P+
Sbjct: 460 QPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPA 496
>AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +3
Query: 186 SPYVRESMLDTHSLWSNLANEMQHLDDMMKELS-LKFPSHYKRRTRGRRQ-----VSDIY 347
+P V+ES + + S ++N + + +LS K PS K + R +Q + + +
Sbjct: 400 APTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYF 459
Query: 348 SPAWLRTERHQRESEKWSADGAG*QCF*SLLENTEPS 458
P+ + ER + E S A + SLLE T+P+
Sbjct: 460 QPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPA 496
>AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory
protein p95 protein.
Length = 754
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +3
Query: 186 SPYVRESMLDTHSLWSNLANEMQHLDDMMKELS-LKFPSHYKRRTRGRRQ-----VSDIY 347
+P V+ES + + S ++N + + +LS K PS K + R +Q + + +
Sbjct: 400 APTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYF 459
Query: 348 SPAWLRTERHQRESEKWSADGAG*QCF*SLLENTEPS 458
P+ + ER + E S A + SLLE T+P+
Sbjct: 460 QPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPA 496
>AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +3
Query: 186 SPYVRESMLDTHSLWSNLANEMQHLDDMMKELS-LKFPSHYKRRTRGRRQ-----VSDIY 347
+P V+ES + + S ++N + + +LS K PS K + R +Q + + +
Sbjct: 400 APTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYF 459
Query: 348 SPAWLRTERHQRESEKWSADGAG*QCF*SLLENTEPS 458
P+ + ER + E S A + SLLE T+P+
Sbjct: 460 QPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPA 496
>AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein.
Length = 754
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +3
Query: 186 SPYVRESMLDTHSLWSNLANEMQHLDDMMKELS-LKFPSHYKRRTRGRRQ-----VSDIY 347
+P V+ES + + S ++N + + +LS K PS K + R +Q + + +
Sbjct: 400 APTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYF 459
Query: 348 SPAWLRTERHQRESEKWSADGAG*QCF*SLLENTEPS 458
P+ + ER + E S A + SLLE T+P+
Sbjct: 460 QPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPA 496
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,604,147
Number of Sequences: 237096
Number of extensions: 1953131
Number of successful extensions: 8732
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8732
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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