Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H03
         (847 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3419|AAF46866.2|  775|Drosophila melanogaster CG33143-P...    31   2.0  
AF145629-1|AAD38604.1|  985|Drosophila melanogaster BcDNA.GH0558...    30   3.5  
AE013599-714|AAM68837.1|  985|Drosophila melanogaster CG8740-PC,...    30   3.5  
AE013599-713|AAM68836.1|  985|Drosophila melanogaster CG8740-PB,...    30   3.5  
AE013599-712|AAF59045.1|  985|Drosophila melanogaster CG8740-PA,...    30   3.5  
AY095075-1|AAM11403.1|  295|Drosophila melanogaster RE24507p pro...    29   6.1  
AE014296-853|AAF47905.2|  295|Drosophila melanogaster CG15022-PA...    29   6.1  

>AE013599-3419|AAF46866.2|  775|Drosophila melanogaster CG33143-PB,
           isoform B protein.
          Length = 775

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = +3

Query: 102 CGLLAAVSAAPQYYHGSSHWPYHHYDPFSPYVRESMLDTHSLWSNLANEMQHLDDM 269
           C   AAVSAA  + HG SH       P + YVR   +D  S+    AN ++++D +
Sbjct: 255 CASSAAVSAASSHGHGHSHG-----TPVNTYVRGPSVDNQSIVG--ANVLENVDSL 303


>AF145629-1|AAD38604.1|  985|Drosophila melanogaster BcDNA.GH05582
           protein.
          Length = 985

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 240 ANEMQHLDDMMKELSLKFPSHYKRRTRGRRQVSDIYSPAWLRTERHQRES 389
           A+ MQHLD+   E+  +   HY  R+R    +S+  S     TERH+R S
Sbjct: 722 ASSMQHLDNGSDEVDFRKRRHYS-RSRELHDISESGSEP-EPTERHKRSS 769


>AE013599-714|AAM68837.1|  985|Drosophila melanogaster CG8740-PC,
           isoform C protein.
          Length = 985

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 240 ANEMQHLDDMMKELSLKFPSHYKRRTRGRRQVSDIYSPAWLRTERHQRES 389
           A+ MQHLD+   E+  +   HY  R+R    +S+  S     TERH+R S
Sbjct: 722 ASSMQHLDNGSDEVDFRKRRHYS-RSRELHDISESGSEP-EPTERHKRSS 769


>AE013599-713|AAM68836.1|  985|Drosophila melanogaster CG8740-PB,
           isoform B protein.
          Length = 985

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 240 ANEMQHLDDMMKELSLKFPSHYKRRTRGRRQVSDIYSPAWLRTERHQRES 389
           A+ MQHLD+   E+  +   HY  R+R    +S+  S     TERH+R S
Sbjct: 722 ASSMQHLDNGSDEVDFRKRRHYS-RSRELHDISESGSEP-EPTERHKRSS 769


>AE013599-712|AAF59045.1|  985|Drosophila melanogaster CG8740-PA,
           isoform A protein.
          Length = 985

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 240 ANEMQHLDDMMKELSLKFPSHYKRRTRGRRQVSDIYSPAWLRTERHQRES 389
           A+ MQHLD+   E+  +   HY  R+R    +S+  S     TERH+R S
Sbjct: 722 ASSMQHLDNGSDEVDFRKRRHYS-RSRELHDISESGSEP-EPTERHKRSS 769


>AY095075-1|AAM11403.1|  295|Drosophila melanogaster RE24507p
           protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = +3

Query: 138 YYHGSSH-WPYHHYDPFSPYVRESMLDTHSLWSNLANEMQHLDDMMKELSLKFPSHY 305
           ++H   H   +HHYD  S +   S  D H L  +L  +  H     +E     PS Y
Sbjct: 38  HHHDHDHDHDHHHYDVHSHHHSPSSHDHHDLHIDLHYQPDHHHHHHQEAKFDIPSGY 94


>AE014296-853|AAF47905.2|  295|Drosophila melanogaster CG15022-PA
           protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = +3

Query: 138 YYHGSSH-WPYHHYDPFSPYVRESMLDTHSLWSNLANEMQHLDDMMKELSLKFPSHY 305
           ++H   H   +HHYD  S +   S  D H L  +L  +  H     +E     PS Y
Sbjct: 38  HHHDHDHDHDHHHYDVHSHHHSPSSHDHHDLHIDLHYQPDHHHHHHQEAKFDIPSGY 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,227,982
Number of Sequences: 53049
Number of extensions: 590451
Number of successful extensions: 1661
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1661
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)