Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_H01
         (864 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11; Ditrys...    52   2e-05
UniRef50_Q848K8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_UPI0000EBD246 Cluster: PREDICTED: hypothetical protein;...    33   9.3  
UniRef50_Q0ITL7 Cluster: Os11g0241200 protein; n=1; Oryza sativa...    33   9.3  
UniRef50_A2WXH5 Cluster: Putative uncharacterized protein; n=2; ...    33   9.3  

>UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11;
           Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 189

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +1

Query: 250 QQFNSLTKSKXAXXFSKAWKXGSESVLQQLXAFAKSLQG 366
           +QFNSL  SK    F+KA K GS+SVLQQL AF+ SLQG
Sbjct: 48  EQFNSLVNSKNTQDFNKALKDGSDSVLQQLSAFSSSLQG 86



 Score = 42.7 bits (96), Expect = 0.012
 Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 4/44 (9%)
 Frame = +3

Query: 120 MAAKFVV-LFACIALAQGAXVRRXAP---DFFKXXEHHTKEFXK 239
           MAAKFVV L AC+AL+  A VRR AP   + F+  E H KEF K
Sbjct: 1   MAAKFVVVLAACVALSHSAMVRRDAPAGGNAFEEMEKHAKEFQK 44



 Score = 42.7 bits (96), Expect = 0.012
 Identities = 20/38 (52%), Positives = 24/38 (63%)
 Frame = +1

Query: 565 NVXEXNEKLAPXIKXAYDDFAKNXQEVXXKXXEXXXAQ 678
           N+ E N+KLAP IK AYDDF K+ +EV  K  E    Q
Sbjct: 152 NMEETNKKLAPKIKQAYDDFVKHAEEVQKKLHEAATKQ 189



 Score = 36.7 bits (81), Expect = 0.76
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = +3

Query: 465 NVEKNAXALREKLQAAVXNXVXXSXKLAKXVSS 563
           +VEK A A ++KLQAAV   V  S KLAK V+S
Sbjct: 119 DVEKEANAFKDKLQAAVQTTVQESQKLAKEVAS 151


>UniRef50_Q848K8 Cluster: Putative uncharacterized protein; n=1;
           uncultured bacterium|Rep: Putative uncharacterized
           protein - uncultured bacterium
          Length = 361

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -2

Query: 407 PKPPXPCRSRLRAXPWR 357
           P+ P PCRSRLR  PWR
Sbjct: 344 PRVPRPCRSRLRRPPWR 360


>UniRef50_UPI0000EBD246 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 253

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 443 PRPXARXSASTVPKPPXPCRSRLRAXPWRLLAKAXSCC 330
           PRP  + S +   +P  P    LR  P R LA+   CC
Sbjct: 206 PRPRRQDSPTVASRPELPASQPLRVPPTRPLARLTDCC 243


>UniRef50_Q0ITL7 Cluster: Os11g0241200 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os11g0241200 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 164

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 449 GAPRPXARXSASTVPKPPXPCRSRLRAXP 363
           GAPR   R  A T P+PP  CR+  R  P
Sbjct: 127 GAPRRSRRGGARTTPRPPGGCRAGSRTAP 155


>UniRef50_A2WXH5 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 479

 Score = 33.1 bits (72), Expect = 9.3
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 401 PPXPCRSRLRAXPWRLL-AKAXSCCSTDS 318
           PP P R RLR  PWRLL ++    CS D+
Sbjct: 33  PPNPSRLRLRLSPWRLLRSRRGLSCSADA 61


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,426,403
Number of Sequences: 1657284
Number of extensions: 3386197
Number of successful extensions: 8739
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8716
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76652910257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)