Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G22
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       25   0.78 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    24   1.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   7.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   7.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   7.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.7  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 155 GTARHRHEQHSESKENNGLH 96
           G    RHE+H ES   N LH
Sbjct: 86  GDKHDRHERHFESSFGNNLH 105


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 516 IYDVTFCCYCIYKKIKNVLRF 578
           ++ + F C+ + K + NVLRF
Sbjct: 362 LFSIGFNCFWVMKLLYNVLRF 382


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 492 WNFFIATSIYDVTFCCYCIYKKIKNVL 572
           W F +   I    F C  I KK+ ++L
Sbjct: 157 WLFILWVGILSTIFLCDTILKKVDDIL 183


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 315 RNCSCS*HTRFRMTWVSLLSFQRR*G 238
           RNCS      +R+ W+SL    ++ G
Sbjct: 217 RNCSAYIIAHYRVLWLSLSDLLQKMG 242


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 315 RNCSCS*HTRFRMTWVSLLSFQRR*G 238
           RNCS      +R+ W+SL    ++ G
Sbjct: 217 RNCSAYIIAHYRVLWLSLSDLLQKMG 242


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 315 RNCSCS*HTRFRMTWVSLLSFQRR*G 238
           RNCS      +R+ W+SL    ++ G
Sbjct: 217 RNCSAYIIAHYRVLWLSLSDLLQKMG 242


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +3

Query: 468 WHIKLAFYWNFFIATSIYDVTFCCYCIYK 554
           W +  A  W +   +S +   F CYC  K
Sbjct: 403 WSVN-AGMWMWLSCSSFFQQFFHCYCPIK 430


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,728
Number of Sequences: 336
Number of extensions: 2907
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)