BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP04_F_G22 (880 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011 SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) 36 0.057 SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.100 SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19) 34 0.13 SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.23 SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.23 SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30 SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 32 0.53 SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.70 SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26) 31 0.93 SB_15403| Best HMM Match : CH (HMM E-Value=0) 31 0.93 SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 31 1.2 SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 1.2 SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16) 31 1.2 SB_804| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6 SB_16801| Best HMM Match : MSSP (HMM E-Value=0.31) 29 6.6 SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 8.7 SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7 SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 28 8.7 >SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3261 Score = 37.9 bits (84), Expect = 0.011 Identities = 20/60 (33%), Positives = 28/60 (46%) Frame = +3 Query: 204 ACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDGIRLS 383 +C DCT PICA +++ NEC+M CE+ L S CP D + L+ Sbjct: 2153 SCPDDCTNET-KPICASDG----QTYDNECLMQKRACENNQNLNVTSDRACPCKDPVDLA 2207 Score = 32.3 bits (70), Expect = 0.53 Identities = 23/71 (32%), Positives = 33/71 (46%) Frame = +3 Query: 144 SCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHK 323 SCRP LD K V A C +C+ + +DP+C G ++ NEC+M C Sbjct: 1194 SCRP--LDNKPVCA-------CPENCS-STVDPVC----GSDNNTYDNECLMRQQACVAN 1239 Query: 324 DTLRKISQGQC 356 T+ +G C Sbjct: 1240 TTVAVRRKGDC 1250 Score = 31.5 bits (68), Expect = 0.93 Identities = 23/71 (32%), Positives = 33/71 (46%) Frame = +3 Query: 144 SCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHK 323 SCRP LD K V A C +C+ + +DP+C G ++ NEC+M C Sbjct: 1123 SCRP--LDNKPVCA-------CPENCS-STVDPVC----GTDNNTYDNECLMRQQACVAN 1168 Query: 324 DTLRKISQGQC 356 T+ +G C Sbjct: 1169 ATVAVRRKGHC 1179 Score = 31.1 bits (67), Expect = 1.2 Identities = 17/57 (29%), Positives = 22/57 (38%) Frame = +3 Query: 186 DAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 D + C DC K L P+C G + NEC+M C T+ G C Sbjct: 1366 DGKATCECSEDCPKT-LKPVC----GSDNNDYDNECLMQARACATNKTITAHRNGYC 1417 Score = 29.9 bits (64), Expect = 2.8 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +3 Query: 261 GEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 371 G K++ NECV+ CE TL ++G C +G Sbjct: 1662 GSDGKTYDNECVLRMAACESNRTLAVRNEGNCGLCEG 1698 Score = 29.1 bits (62), Expect = 5.0 Identities = 17/57 (29%), Positives = 26/57 (45%) Frame = +3 Query: 186 DAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 D E C DC K + + +C G K++ NEC+M C + + S G+C Sbjct: 1783 DNEAVCECPKDCPKEDAE-VC----GTNWKTYTNECMMRKQACMNNSMVTVRSIGRC 1834 Score = 28.7 bits (61), Expect = 6.6 Identities = 14/41 (34%), Positives = 17/41 (41%) Frame = +3 Query: 234 LDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 LDP+CA P NEC M C+ L +G C Sbjct: 1588 LDPVCASDNNTYP----NECAMKQLACQSAKVLTFRRKGDC 1624 >SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) Length = 69 Score = 35.5 bits (78), Expect = 0.057 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +3 Query: 207 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 C+ C N DP+C G K++GNEC++ C T+ G+C Sbjct: 24 CVRPCPAIN-DPVC----GTDGKTYGNECMLGAATCHSNGTITLAYPGEC 68 >SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2101 Score = 34.7 bits (76), Expect = 0.100 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +3 Query: 228 ANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCP 359 A+ P+CA K++ N M N CE LR +SQG+CP Sbjct: 1529 ADYTPVCASDG----KTYPNRMSMENAGCEKNMILRIVSQGECP 1568 Score = 33.1 bits (72), Expect = 0.30 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = +3 Query: 210 MHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCP 359 M C+ AN +C G ++ NEC + C+ L +SQG CP Sbjct: 1442 MFKCS-ANRSDVC----GSDRMTYSNECTLTQTACQESKNLTVVSQGPCP 1486 Score = 29.9 bits (64), Expect = 2.8 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +3 Query: 240 PICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 P+CA K + N M N CE LR +SQ QC Sbjct: 1979 PVCASDG----KIYPNRMTMENAGCEKNMVLRAVSQDQC 2013 Score = 29.1 bits (62), Expect = 5.0 Identities = 18/65 (27%), Positives = 27/65 (41%) Frame = +3 Query: 174 QVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQ 353 QV+ D C CT + P+C G K++GN+C M C + G+ Sbjct: 1284 QVEDDGSTSCKCPIFCTYEYM-PVC----GTDGKTYGNKCEMRASACLKSTMVTVAYPGE 1338 Query: 354 CPGSD 368 C +D Sbjct: 1339 CESND 1343 Score = 28.3 bits (60), Expect = 8.7 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +3 Query: 237 DPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 DP+CA K++ N C M+ C L +SQG C Sbjct: 1605 DPVCASNG----KTYSNRCDMDADACIRDTKLTVVSQGAC 1640 >SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19) Length = 92 Score = 34.3 bits (75), Expect = 0.13 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +3 Query: 207 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 C CTK P+C G K++GN+CV+ CE + ++ +G+C Sbjct: 39 CNRACTKI-YRPVC----GTDGKTYGNKCVLEIATCESEGAVQLAHEGEC 83 >SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) Length = 2411 Score = 33.5 bits (73), Expect = 0.23 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +3 Query: 198 KKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 K +C C + P+C G KS+G+EC + CE K L +S+G+C Sbjct: 1679 KCSCPIYCPPSG-QPVC----GSDGKSYGSECELRKEACEAKIKLTLVSKGKC 1726 Score = 32.3 bits (70), Expect = 0.53 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 237 DPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPG 362 DP+C G K + NEC++N C LR +++G C G Sbjct: 822 DPVC----GTDNKEYANECLLNVAACAANIHLRVLNKGPCGG 859 Score = 31.9 bits (69), Expect = 0.70 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +3 Query: 228 ANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 + L P+CA +++ NECVM C K+++ K G C Sbjct: 892 SELRPVCASDG----RTYVNECVMRALACSRKESVNKTKDGAC 930 Score = 28.7 bits (61), Expect = 6.6 Identities = 13/50 (26%), Positives = 27/50 (54%) Frame = +3 Query: 207 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 C CT A D +C G +++ N+C++ + +C+ + T+ + +G C Sbjct: 1891 CDEKCTFA-FDAVC----GSNGRTYINDCLLRSDSCKLRKTIVVLQKGAC 1935 Score = 28.3 bits (60), Expect = 8.7 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +3 Query: 237 DPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 DP+CA +++ NEC+ Y CE K L + G+C Sbjct: 624 DPVCASDG----RTYQNECLAKKYACEKKRDL-TFTLGKC 658 >SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) Length = 293 Score = 33.5 bits (73), Expect = 0.23 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = +3 Query: 207 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 CM CTK L+P+C G K++ N CV C+ LR +G C Sbjct: 118 CMRRCTK-ELNPVC----GSDGKTYDNPCVFKIAVCQMNGQLRLKHRGAC 162 Score = 30.3 bits (65), Expect = 2.1 Identities = 18/69 (26%), Positives = 29/69 (42%) Frame = +3 Query: 159 KLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRK 338 +L LK A R C C K P+C G ++ N C++ + C+ T+ Sbjct: 153 QLRLKHRGACGSRPDKCAPICNKM-YQPVC----GSDNVTYSNPCMLRSATCKSNGTITM 207 Query: 339 ISQGQCPGS 365 +G+C S Sbjct: 208 KHRGKCGSS 216 Score = 29.1 bits (62), Expect = 5.0 Identities = 13/50 (26%), Positives = 23/50 (46%) Frame = +3 Query: 207 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 C+ C + P+C G K++GN+C++ C T+ G+C Sbjct: 44 CVRPCPAIYM-PVC----GTDGKTYGNKCMLGAATCRSNGTITLAYPGEC 88 >SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4475 Score = 33.1 bits (72), Expect = 0.30 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +3 Query: 207 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 C +C + P+C G K++ NEC + CE K + SQG+C Sbjct: 3970 CNKNCPSTS-KPVC----GSDGKTYKNECELKRAACESKKNVTVASQGEC 4014 >SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) Length = 320 Score = 32.3 bits (70), Expect = 0.53 Identities = 23/71 (32%), Positives = 33/71 (46%) Frame = +3 Query: 144 SCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHK 323 SCRP LD K V A C +C+ + +DP+C G ++ NEC+M C Sbjct: 263 SCRP--LDNKPVCA-------CPENCS-STVDPVC----GSDNNTYDNECLMRQQACVAN 308 Query: 324 DTLRKISQGQC 356 T+ +G C Sbjct: 309 TTVAVRRKGDC 319 Score = 31.5 bits (68), Expect = 0.93 Identities = 23/71 (32%), Positives = 33/71 (46%) Frame = +3 Query: 144 SCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHK 323 SCRP LD K V A C +C+ + +DP+C G ++ NEC+M C Sbjct: 149 SCRP--LDNKPVCA-------CPENCS-STVDPVC----GTDNNTYDNECLMRQQACVAN 194 Query: 324 DTLRKISQGQC 356 T+ +G C Sbjct: 195 ATVAVRRKGHC 205 >SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3292 Score = 31.9 bits (69), Expect = 0.70 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 10/54 (18%) Frame = +3 Query: 228 ANLDPICAGKTGE---KPKSF----GNECVMNNYNCEHKDTLR---KISQGQCP 359 AN +P+C TGE P + GNEC+ NCE +L ++S GQCP Sbjct: 2012 ANFNPVCNKTTGECYCNPYHYRSPKGNECL--KCNCEEIGSLSLQCRVSDGQCP 2063 >SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26) Length = 143 Score = 31.5 bits (68), Expect = 0.93 Identities = 23/71 (32%), Positives = 33/71 (46%) Frame = +3 Query: 144 SCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHK 323 SCRP LD K V A C +C+ + +DP+C G ++ NEC+M C Sbjct: 15 SCRP--LDNKPVCA-------CPENCS-STVDPVC----GTDNNTYDNECLMRQQACVAN 60 Query: 324 DTLRKISQGQC 356 T+ +G C Sbjct: 61 ATVAVRRKGHC 71 >SB_15403| Best HMM Match : CH (HMM E-Value=0) Length = 1907 Score = 31.5 bits (68), Expect = 0.93 Identities = 13/58 (22%), Positives = 27/58 (46%) Frame = +3 Query: 207 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDGIRL 380 C C N P+C G+ +++ NEC++ +C + ++ ++ G C + L Sbjct: 973 CPRSCPSVNY-PVC----GDDGQTYDNECLLQLESCSRRRSITTVNYGSCGQQQPVHL 1025 >SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) Length = 6725 Score = 31.1 bits (67), Expect = 1.2 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Frame = +3 Query: 216 DCTKANLDPIC----------AGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 +CT N P+C A G +S+ NEC++ +C+ + + +QG C Sbjct: 5212 ECTAINGSPVCTCNSICTLEYAPVCGTDGQSYDNECLLQTASCQRNELIEVATQGTC 5268 Score = 30.7 bits (66), Expect = 1.6 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +3 Query: 234 LDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPG 362 LDP+C G K++ NEC + C+ + + + CPG Sbjct: 5797 LDPVC----GSDGKNYDNECNLRQNACKTNTLITVVRRDACPG 5835 Score = 29.5 bits (63), Expect = 3.7 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +3 Query: 189 AERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 A K+ + C+ + P+C G GE ++ NEC + +C+ + + SQG C Sbjct: 5545 AGEKRLHRNTCS-LDYTPVC-GTDGE---TYENECTLQISSCQRNEQVEVASQGHC 5595 >SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) Length = 1568 Score = 31.1 bits (67), Expect = 1.2 Identities = 18/61 (29%), Positives = 25/61 (40%) Frame = +3 Query: 177 VKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 V D C C K L P+C G K++ NEC+M +C+ + S C Sbjct: 1058 VSVDGTPTCVCPRRCPK-KLMPVC----GSDGKTYNNECLMRAASCKANKNITVSSYFPC 1112 Query: 357 P 359 P Sbjct: 1113 P 1113 Score = 29.9 bits (64), Expect = 2.8 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = +3 Query: 192 ERKKACM-HDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCP 359 ER+ C C N+ P+C G + +EC + C+ + IS+G CP Sbjct: 278 EREAICTCRSCPLINI-PVC----GSDGAQYDSECALQQQACQTDTDITVISEGPCP 329 >SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16) Length = 98 Score = 31.1 bits (67), Expect = 1.2 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +3 Query: 207 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 C C K P+C G K++GN+C++ CE + ++ +G+C Sbjct: 39 CNRACKKI-YSPMC----GTDGKTYGNKCMLEIATCESEGAVKLAHEGEC 83 >SB_804| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 345 Score = 28.7 bits (61), Expect = 6.6 Identities = 14/49 (28%), Positives = 21/49 (42%) Frame = +3 Query: 165 DLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYN 311 D ++AD +R+ C +D +N C G KP + C YN Sbjct: 144 DFNIIRADRQRRSLCDNDFYDSNFYICCDGYISWKPSNDAQCCRHRAYN 192 >SB_16801| Best HMM Match : MSSP (HMM E-Value=0.31) Length = 571 Score = 28.7 bits (61), Expect = 6.6 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -3 Query: 596 CLNDVKKT*NIFDFFINAITTKSDIVN*CCNKKIPIESKFNM 471 C N + NI D N I +I++ CCNK P +K ++ Sbjct: 111 CCNIIDPCCNIIDPCCNIIDPCCNIIDPCCNKLHPCYNKLDL 152 >SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) Length = 3891 Score = 28.3 bits (60), Expect = 8.7 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = +3 Query: 207 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 356 C H CT + P+C+ G + ++ CV++N +C + GQC Sbjct: 2134 CTHTCTVLDGKPVCSCPQGYRLEN-PYRCVLSNASCASSEF--ACESGQC 2180 >SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 557 Score = 28.3 bits (60), Expect = 8.7 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +3 Query: 234 LDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCP 359 LDP+C G K++ N C + C+ + IS+ CP Sbjct: 281 LDPVC----GSDGKNYDNVCKLRQNACKTNTLITLISRDACP 318 >SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) Length = 173 Score = 28.3 bits (60), Expect = 8.7 Identities = 15/61 (24%), Positives = 25/61 (40%) Frame = +3 Query: 183 ADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPG 362 A R C C K P+C G ++ N C++ + C+ T+ +G+C Sbjct: 18 AKGSRPDKCAPICNKM-YQPVC----GSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGS 72 Query: 363 S 365 S Sbjct: 73 S 73 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,529,751 Number of Sequences: 59808 Number of extensions: 368961 Number of successful extensions: 899 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 786 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 899 length of database: 16,821,457 effective HSP length: 82 effective length of database: 11,917,201 effective search space used: 2502612210 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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