Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G22
         (880 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    27   0.30 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    27   0.30 
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              24   1.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.5  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 222 CSHACRPSCAQHQPSPASGPACRDG 148
           CSH C P+   +  SP    AC DG
Sbjct: 43  CSHLCLPAPRINSKSPLLSCACPDG 67


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 222 CSHACRPSCAQHQPSPASGPACRDG 148
           CSH C P+   +  SP    AC DG
Sbjct: 43  CSHLCLPAPRINSKSPLLSCACPDG 67


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 234 LDPICAGKTGEKPKSFGNECVMNNYNCEHKD 326
           L PIC G+TG   K   +E    N N E ++
Sbjct: 29  LQPICVGETGTSQKII-DEVYNGNVNVEDEN 58


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 245 LRWKDRRETQVIRKRVCHEQLQLRTQRYVAQDQPR 349
           L +K   + Q ++ +  H+Q Q +TQ  +   QP+
Sbjct: 407 LAFKMTEQQQQMQAQQQHQQQQQQTQHVINAQQPQ 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,114
Number of Sequences: 438
Number of extensions: 3622
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)