Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_G21
(869 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48648| Best HMM Match : HSBP1 (HMM E-Value=1.5e-16) 70 2e-12
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 31 0.93
SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_46728| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_51105| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_44047| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_27011| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 31 1.6
SB_3491| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_42083| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_51249| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 3.7
SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099) 29 4.9
SB_49526| Best HMM Match : HSBP1 (HMM E-Value=0.28) 29 4.9
SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28) 29 4.9
SB_36581| Best HMM Match : HR1 (HMM E-Value=2.2) 29 6.5
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 28 8.6
SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0) 28 8.6
>SB_48648| Best HMM Match : HSBP1 (HMM E-Value=1.5e-16)
Length = 76
Score = 70.1 bits (164), Expect = 2e-12
Identities = 27/57 (47%), Positives = 45/57 (78%)
Frame = +2
Query: 215 DPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEKNITDLMTQAGV 385
+PK++ ++ Q+V+ LQNMQDKFQ+ D I+ RI++ G R+D++EK++TDLM +G+
Sbjct: 4 NPKSVADLIQFVEGTLQNMQDKFQTAEDSIVKRINDTGKRLDDIEKSLTDLMDHSGI 60
>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 32.3 bits (70), Expect = 0.53
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = +2
Query: 161 NPDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVD 340
NPD I E ++ T A P ++E+ +YVQS L+ R E + +
Sbjct: 600 NPDEI----EIDFETLA--PSTLRELEKYVQSCLRKKHKTPAKKPKNAEEREQEQARKKE 653
Query: 341 ELEKNITDLMTQAGVENEK 397
ELE+ + D+ + G +K
Sbjct: 654 ELERRLQDVSGKLGAPAQK 672
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/51 (29%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +2
Query: 221 KNMQEVTQYVQSLLQNMQDKFQSMSDQI---INRIDEMGSRVDELEKNITD 364
KN+QEV++ L MQ++ Q+ S Q+ + +++E+ S + L+++++D
Sbjct: 901 KNLQEVSENKTKQLSKMQEELQTTSVQLRDALAKVEELKSNKELLQQSLSD 951
>SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1505
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 206 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 346
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 594 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 641
>SB_46728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 206 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 346
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 204 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 251
>SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 206 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 346
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 271 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 318
>SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1586
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 206 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 346
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 652 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 699
>SB_51105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 206 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 346
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 261 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 308
>SB_44047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 206 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 346
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 204 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 251
>SB_27011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 206 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 346
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 186 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 233
>SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 1212
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 206 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 346
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 600 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 647
>SB_3491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 206 PASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQ-IINRIDEMGSRVDEL 346
P P+ + QY + L +QDKF + +Q + R +++G V+ L
Sbjct: 228 PVEPPQRKGRLPQYAREKLLELQDKFDELENQGVFKRPEDVGISVEYL 275
>SB_42083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +2
Query: 158 PNPDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRV 337
P P IV+ + E T A+ KN+ V + + M+ F+SM QI NR+D++ +V
Sbjct: 161 PGPTTIVE--DEELVTMAA-VKNLLAVQESM------MRSVFESMVSQISNRVDDLVEKV 211
Query: 338 DELEKNITDLMTQAGVE 388
L+ ++ TQ+ VE
Sbjct: 212 SGLKASLE--FTQSDVE 226
>SB_51249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 239
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 793 KQEFYVNHHTGXIHCNSITVNHKTE 719
K+ FY+ H + C TVN KTE
Sbjct: 45 KKSFYLEHRLSALECRLFTVNFKTE 69
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +2
Query: 161 NPDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVD 340
N V + EN+ ++ K +++ ++ + N+++ ++ +DQ+ ++ S++
Sbjct: 1826 NAKREVVDRENQIQWHKNNEKQLEDEISVLKQKISNLRESNENYADQVA----KLNSQIQ 1881
Query: 341 ELEKNITDL---MTQAGVENEK 397
E E I DL M ENEK
Sbjct: 1882 ERESRIADLEHFMNLLRDENEK 1903
>SB_53461| Best HMM Match : Amelogenin (HMM E-Value=0.099)
Length = 2489
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 161 NPDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVD 340
+P ++V N+E + S+P+ + + + + + +N DKF + SD R DE G ++
Sbjct: 277 SPVSLVSNSETSVNF-CSNPRKLLNLCKTTKDINENQSDKFGNWSD----RRDESGVKLS 331
Query: 341 EL 346
++
Sbjct: 332 DV 333
>SB_49526| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 469
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = +2
Query: 158 PNPDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRV 337
P P IV+ + E+ T A+ KN+ V + + M+ F+SM QI +R+D++ +V
Sbjct: 19 PGPTTIVE--DEEFVTMAA-VKNLLAVQESM------MRSVFESMVSQISSRVDDLVEKV 69
Query: 338 DELEKNITDLMTQAGVE 388
L+ ++ TQ+ VE
Sbjct: 70 SGLKASLE--FTQSEVE 84
>SB_58227| Best HMM Match : HSBP1 (HMM E-Value=0.28)
Length = 565
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = +2
Query: 158 PNPDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRV 337
P P IV+ + E+ T A+ KN+ V + + M+ F+SM QI +R+D++ +V
Sbjct: 19 PGPTTIVE--DEEFVTMAA-VKNLLAVQESM------MRSVFESMVSQISSRVDDLVEKV 69
Query: 338 DELEKNITDLMTQAGVE 388
L+ ++ TQ+ VE
Sbjct: 70 SGLKASLE--FTQSEVE 84
>SB_36581| Best HMM Match : HR1 (HMM E-Value=2.2)
Length = 760
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 260 LQNMQDKFQSMSDQIINRIDEMGSRVDELEKNITDLMTQAGVENE 394
LQ D + D+I + SR+ +LEK + +L +Q VE+E
Sbjct: 59 LQTRLDAELNARDKISQSSQTVQSRITQLEKQVAELHSQLKVESE 103
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/56 (17%), Positives = 33/56 (58%)
Frame = +2
Query: 209 ASDPKNMQEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEKNITDLMTQ 376
+ DP ++ + +Q + ++++ ++++++ R+D++ +V L+K +LM +
Sbjct: 476 SKDPGLSEDESHVIQKEADDCEERWDTLNEKVSGRVDDVVHKVLLLQKKEKELMDE 531
>SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 1381
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -2
Query: 250 YVLCHFLHIFWIAGW---C*VFIFCVFNNIVRV 161
Y LC FL WI GW ++IF VF + +
Sbjct: 634 YYLCWFLQALWIFGWSAAASIWIFWVFLKFIDI 666
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,121,457
Number of Sequences: 59808
Number of extensions: 415260
Number of successful extensions: 1058
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2491217872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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