Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G21
         (869 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    27   0.17 
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           25   0.91 
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           25   0.91 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   1.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.4  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   6.4  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   8.5  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -2

Query: 436 DILTQIDR*KLFLLFIFNTSLCHKICNILFQFINSASHFIN 314
           D LT  +  ++F+  IF  S C  +  I++ +    SH +N
Sbjct: 200 DYLTDTNEIRIFVATIFTFSYCIPMILIIYYYSQIVSHVVN 240


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 529 RKSRYSLNLKLQFPQTKLPHPKNL 600
           R+ RY+  LK   P+ K P PK+L
Sbjct: 54  RRHRYNFQLKPYNPEHKPPGPKDL 77


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 529 RKSRYSLNLKLQFPQTKLPHPKNL 600
           R+ RY+  LK   P+ K P PK+L
Sbjct: 55  RRHRYNFQLKPYNPEHKPPGPKDL 78


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +2

Query: 143 FNMAXPNPDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDK 280
           FN +    ++ + +TE  YS       N Q+ TQY+     N+Q+K
Sbjct: 369 FNESENRRNSCLGSTETYYSK-----HNTQQFTQYIPESSSNLQEK 409


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 143 FNMAXPNPDNIVKNTENEYSTPASDP 220
           +N    N +N++ +    YST   DP
Sbjct: 393 YNFDFQNKNNLIPSALQSYSTSMRDP 418


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 143 FNMAXPNPDNIVKNTENEYSTPASDP 220
           +N    N +N++ +    YST   DP
Sbjct: 393 YNFDFQNKNNLIPSALQSYSTSMRDP 418


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 196 FIFCVFNNIVRVRXCHIKENK 134
           FIF  FN++VR R   I+ +K
Sbjct: 22  FIFLYFNSLVRFRRFTIELDK 42


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 664 SQQFSTTFNFPTFNQQPSVQFYDLQLC 744
           SQ + T  +FP+    PSV+  + Q C
Sbjct: 377 SQNYLTVHSFPSTLNIPSVKIDEDQKC 403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,986
Number of Sequences: 438
Number of extensions: 4535
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)