Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_G16
(874 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 75 6e-14
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 65 8e-11
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 62 4e-10
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 56 5e-08
11_04_0388 + 17076157-17076254,17076762-17076813,17077672-170778... 44 2e-04
07_03_0951 - 22836167-22836358,22836455-22837213 33 0.23
06_01_1006 + 7836366-7836460,7836568-7836626,7836877-7836961,783... 31 1.2
07_03_1076 + 23779941-23779988,23780102-23780191,23781580-237816... 30 2.1
11_01_0366 + 2793732-2793838,2793944-2794979 29 3.7
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006... 29 6.4
11_01_0299 - 2241760-2241990,2242958-2243331,2243427-2243754 28 8.5
>03_02_0665 -
10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 75.4 bits (177), Expect = 6e-14
Identities = 57/165 (34%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Frame = +3
Query: 180 ADNSVDPPAKKRKLNT----------GEAHSNNSAMANNGARVEDEIDESLYSRQLYVLG 329
A++S D PAKK ++ GEA ++ NG+ V EIDE L+SRQL V G
Sbjct: 127 AESSSDAPAKKARVGASASEAEAMVAGEAGGGGGGVSGNGSEVA-EIDEDLHSRQLAVYG 185
Query: 330 HDAMRRMASSDVLISGLGGLGVEIAKNVILGWCXVGNFA*RQKLHRG*SFLAVLPFRDCN 509
+ MRR+ +S+VL+SGL GLG EIAKN+ L + D
Sbjct: 186 RETMRRLFASNVLVSGLNGLGAEIAKNLALAGVKSITLHDMGNVEMWDLSGNFFLSEDDI 245
Query: 510 WSEQGFNIVRTLSELNHYVPTTAYTGPLTEDFWRKFRVVVLTGAS 644
+ L ELN+ V + T LT + KF+ VV T S
Sbjct: 246 GKNRAVACTAKLQELNNAVLISTLTEDLTNEHLSKFQAVVFTDIS 290
Score = 52.8 bits (121), Expect = 3e-07
Identities = 44/129 (34%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Frame = +1
Query: 406 KTLSLGGVXSVTLHDDKNCTVADLSSQFYLSETVIGQNKALTSCEHFLN*TTMCPLLLTQ 585
K L+L GV S+TLHD N + DLS F+LSE IG+N+A+ +C L L+ T
Sbjct: 211 KNLALAGVKSITLHDMGNVEMWDLSGNFFLSEDDIGKNRAV-ACTAKLQELNNAVLISTL 269
Query: 586 DX*LKTFGVSS----VLWSSQEHRGLXXXXXLRSSPPITXHGSLLILXXCS--HXXFCDF 747
L +S V + R+ P S + C FCDF
Sbjct: 270 TEDLTNEHLSKFQAVVFTDISLDKAFEFDDYCRNHQPSI---SFIKAEVCGLFGSVFCDF 326
Query: 748 GPXFTVLNV 774
GP FTVL+V
Sbjct: 327 GPKFTVLDV 335
>11_01_0039 -
290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 64.9 bits (151), Expect = 8e-11
Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +3
Query: 285 EIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGWCXVGNFA*RQKLH 464
EIDE L+SRQL V G + M+R+ +S+VL+SGL GLG EIAKN++L N +
Sbjct: 155 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVNLHDDDNVE 214
Query: 465 R-G*SFLAVLPFRDCNWSEQGFNIVRTLSELNHYVPTTAYTGPLTEDFWRKFRV 623
S L +D + V+ L ELN+ V + TG LT++ F++
Sbjct: 215 LWDLSSNFFLTEKDVG-QNRAQTCVQKLQELNNAVIISTITGDLTKEQLSNFQL 267
Score = 50.8 bits (116), Expect = 1e-06
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Frame = +1
Query: 406 KTLSLGGVXSVTLHDDKNCTVADLSSQFYLSETVIGQNKALTSCEHF--LN*TTMCPLL- 576
K L L GV SV LHDD N + DLSS F+L+E +GQN+A T + LN + +
Sbjct: 195 KNLVLAGVKSVNLHDDDNVELWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVIISTIT 254
Query: 577 --LTQDX*LKTFGVSSV-----LWSSQE---------HRGLXXXXXLRS-SPPITXHGSL 705
LT++ L F + + +W+S + + + + PPI S
Sbjct: 255 GDLTKEQ-LSNFQLPQIPLLLDIWNSIKAVVFTDISLEKAVEFDSYCHNHQPPIAFIKS- 312
Query: 706 LILXXCSHXXFCDFGPXFTVLNV 774
+ FCDFGP FTVL+V
Sbjct: 313 -EIRGLFGSVFCDFGPEFTVLDV 334
>12_01_0038 -
312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 62.5 bits (145), Expect = 4e-10
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +3
Query: 285 EIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGWCXVGNFA*RQKLH 464
EIDE L+SRQL V G + M+R+ +S+VL+SGL GLG EIAKN++L +
Sbjct: 78 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVTLHDDDNVE 137
Query: 465 R-G*SFLAVLPFRDCNWSEQGFNIVRTLSELNHYVPTTAYTGPLTEDFWRKFRV 623
S L +D + V+ L ELN+ V + TG LT++ F++
Sbjct: 138 LWDLSSNFFLTEKDVG-QNRAQTCVQKLQELNNAVIISTITGDLTKEQLSNFQL 190
Score = 52.8 bits (121), Expect = 3e-07
Identities = 48/143 (33%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Frame = +1
Query: 406 KTLSLGGVXSVTLHDDKNCTVADLSSQFYLSETVIGQNKALTSCEHF--LN*TTMCPLL- 576
K L L GV SVTLHDD N + DLSS F+L+E +GQN+A T + LN + +
Sbjct: 118 KNLVLAGVKSVTLHDDDNVELWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVIISTIT 177
Query: 577 --LTQDX*LKTFGVSSV-----LWSSQE---------HRGLXXXXXLRS-SPPITXHGSL 705
LT++ L F + + +W+S + + + + PPI S
Sbjct: 178 GDLTKEQ-LSNFQLPQIPLLLDIWNSIKAVVFTDISLEKAVEFDSYCHNHQPPIAFIKS- 235
Query: 706 LILXXCSHXXFCDFGPXFTVLNV 774
+ FCDFGP FTVL+V
Sbjct: 236 -EIRGLFGSVFCDFGPEFTVLDV 257
>07_03_1774 +
29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 55.6 bits (128), Expect = 5e-08
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +3
Query: 201 PAKKRKLNTGEAHSNNSA---MANNGAR---VEDEIDESLYSRQLYVLGHDAMRRMASSD 362
P KR T + + +A NG+ V EIDE L+SRQL V G + MRR+ +S
Sbjct: 16 PTNKRAAGTDDDRPTDPKRPKVAQNGSTNGVVVPEIDEDLHSRQLAVYGRETMRRLFASH 75
Query: 363 VLISGLGGLGVEIAKN 410
VL+SGL GLG EI +
Sbjct: 76 VLVSGLNGLGAEIGSS 91
Score = 55.2 bits (127), Expect = 6e-08
Identities = 48/130 (36%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Frame = +1
Query: 406 KTLSLGGVXSVTLHDDKNCTVADLSSQFYLSETVIGQNKALTSCEHFLN*TTMCPLLLTQ 585
K L+L GV SVTLHD KN + DLS+ F+LSE IG+N+A +C L L+
Sbjct: 117 KNLALAGVKSVTLHDVKNVEMWDLSANFFLSENDIGKNRA-AACVSKLQELNNAVLVSAL 175
Query: 586 DX*LKTFGVSSVLWSSQEHRGLXXXXXL-----RSSPPITXHGSLLILXXCS--HXXFCD 744
L T +S GL PPI S + C FCD
Sbjct: 176 TEELTTDHLSKFQAVVFTDIGLDKAYEFDDYCHSHCPPI----SFIKAEVCGLFGTVFCD 231
Query: 745 FGPXFTVLNV 774
FGP FTVL+V
Sbjct: 232 FGPEFTVLDV 241
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3
Query: 534 VRTLSELNHYVPTTAYTGPLTEDFWRKFRVVVLT 635
V L ELN+ V +A T LT D KF+ VV T
Sbjct: 160 VSKLQELNNAVLVSALTEELTTDHLSKFQAVVFT 193
>11_04_0388 +
17076157-17076254,17076762-17076813,17077672-17077867,
17078242-17078321,17078465-17078581,17078895-17078950,
17079238-17079268,17079292-17079342,17080411-17080477,
17080621-17080724,17080802-17080909,17081874-17081987
Length = 357
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +3
Query: 267 GARVEDEI---DESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVIL 419
G E+E+ + +LY RQ+ V G DA +R++ + VL+ G+ G E KN++L
Sbjct: 4 GGGAEEELTAQETALYDRQIRVWGVDAQKRLSKAHVLVCGMNGTTTEFCKNIVL 57
>07_03_0951 - 22836167-22836358,22836455-22837213
Length = 316
Score = 33.5 bits (73), Expect = 0.23
Identities = 27/82 (32%), Positives = 36/82 (43%)
Frame = -1
Query: 403 AISTPKPPRPDIRTSELAIRRIASWPST*SWREYRLSSISSSTRAPLFAIAELFECASPV 224
A+S P P P +S RR SW S R + S+ S T AP +ELF S
Sbjct: 61 ALSPPPTPTPSQPSSSYHRRRRESWESAAGSRHTSIRSVGSDT-AP----SELFPTMSRE 115
Query: 223 FSFRFFAGGSTELSATSALDIG 158
FS A + +A +A + G
Sbjct: 116 FSAMVAAAANANAAAAAAANGG 137
>06_01_1006 +
7836366-7836460,7836568-7836626,7836877-7836961,
7837349-7837496,7837774-7837986,7838403-7838537,
7838659-7838790,7838884-7839099,7839212-7839336,
7839787-7839844,7839977-7840087
Length = 458
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +3
Query: 276 VEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVI 416
++DE+ +R + G ++ +++ S V++ GLGG+G A ++
Sbjct: 69 LDDEVVSEQLTRNIQFFGMESQKKVTGSFVVVIGLGGVGSHAASMLL 115
>07_03_1076 +
23779941-23779988,23780102-23780191,23781580-23781663,
23781792-23782010,23782873-23782974,23783809-23784207,
23784332-23784561,23784749-23784842,23784931-23785113,
23785254-23785351,23785831-23786143
Length = 619
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 406 KTLSLGGVXSVTLHDDKNCTVADLSSQFYLSETVIGQNKA 525
KTL+L G + + D V++L+ QF ++ +GQ+KA
Sbjct: 34 KTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQSKA 73
>11_01_0366 + 2793732-2793838,2793944-2794979
Length = 380
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 312 QLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVIL 419
+L + HD R ++ VL+ G G +GVE+A +++
Sbjct: 115 RLQMFEHDKARIASAGSVLVVGGGPIGVELAAEIVM 150
>03_06_0476 +
34199577-34199638,34200267-34200397,34200535-34200698,
34201007-34201117,34201308-34201387,34201489-34201639,
34201736-34201829,34202421-34202509,34203672-34203745,
34203859-34204021,34204445-34204530,34205011-34205094,
34205186-34205366,34205837-34205887
Length = 506
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 303 YSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILG 422
Y RQL + G + + + + G G E KN++LG
Sbjct: 16 YDRQLRIWGDQGQAALEKASICLLTCGPTGTEAMKNLVLG 55
>11_01_0299 - 2241760-2241990,2242958-2243331,2243427-2243754
Length = 310
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -1
Query: 514 DQLQSLKGRTARKDQPRCNFCRHAKLPTXHHPRITFFAISTPKP 383
D L+ +GR A+ RC CR LP H + + P+P
Sbjct: 115 DALELEEGRIAQLISYRCCRCRRRPLPKCPHSDFYYSKVPEPQP 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,198,409
Number of Sequences: 37544
Number of extensions: 443454
Number of successful extensions: 1149
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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