Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_G16
(874 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57150| Best HMM Match : ThiF (HMM E-Value=2.8e-35) 110 1e-24
SB_28306| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 5e-11
SB_4956| Best HMM Match : ThiF (HMM E-Value=0) 31 1.6
SB_48047| Best HMM Match : Phage_QLRG (HMM E-Value=5.3) 31 1.6
SB_22173| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19) 30 2.8
SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5) 30 2.8
SB_48254| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 29 5.0
SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 28 8.7
SB_17285| Best HMM Match : rve (HMM E-Value=1.3e-16) 28 8.7
SB_576| Best HMM Match : RVT_1 (HMM E-Value=0) 28 8.7
SB_48617| Best HMM Match : Drf_FH1 (HMM E-Value=3.7) 28 8.7
SB_36929| Best HMM Match : rve (HMM E-Value=1.2e-16) 28 8.7
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_6960| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 28 8.7
SB_2890| Best HMM Match : rve (HMM E-Value=0.044) 28 8.7
>SB_57150| Best HMM Match : ThiF (HMM E-Value=2.8e-35)
Length = 1026
Score = 110 bits (265), Expect = 1e-24
Identities = 80/196 (40%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Frame = +3
Query: 183 DNSVDPPAKKRKLNTGEAH--SNNSAMANNGAR-----VEDE-------IDESLYSRQLY 320
D + PPAK+++ H +NNS NN V DE IDE LYSRQLY
Sbjct: 6 DQTTSPPAKRQRTTENSDHRTTNNSLACNNHVNNSSQSVRDEGQAEKMDIDEGLYSRQLY 65
Query: 321 VLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGWCXVGNFA*RQKLH-RG*SFLAVLPF 497
VLGH+AM++MA S+VLISGL GLGVEIAKNV+LG + + L
Sbjct: 66 VLGHEAMKKMAVSNVLISGLRGLGVEIAKNVVLGGVKSVTLHDTGAVELSDLTSQFFLNK 125
Query: 498 RDCNWSEQGFNIVRTLSELNHYVPTTAYTGPLTEDFWRKFRVVVLTGASWAXXXXXXAFL 677
+D + + R ++ELN YV + T LTE+F KF+VVVLT +S F
Sbjct: 126 KDVGKNRAEVSHPR-IAELNTYVSMSVNTQKLTEEFINKFQVVVLTESSLEEQLWISDFC 184
Query: 678 XPNNIXWVIADTKXLF 725
I +I+DTK LF
Sbjct: 185 HSKGIKLIISDTKGLF 200
Score = 45.6 bits (103), Expect = 5e-05
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = +1
Query: 406 KTLSLGGVXSVTLHDDKNCTVADLSSQFYLSETVIGQNKALTS 534
K + LGGV SVTLHD ++DL+SQF+L++ +G+N+A S
Sbjct: 94 KNVVLGGVKSVTLHDTGAVELSDLTSQFFLNKKDVGKNRAEVS 136
>SB_28306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 65.7 bits (153), Expect = 5e-11
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +3
Query: 285 EIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVIL 419
EID+SLYSRQ Y+LG AM++MA + V +SG+GGLGVEIAKN+ L
Sbjct: 6 EIDDSLYSRQRYMLGDQAMQKMAHASVFLSGVGGLGVEIAKNLTL 50
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = +1
Query: 406 KTLSLGGVXSVTLHDDKNCTVADLSSQFYLSETVI--GQNKALTS 534
K L+L G+ S+TLHD + ++ADL SQF+L E + +N+A+ S
Sbjct: 46 KNLTLAGIKSITLHDTRAASMADLGSQFFLREDDVTSSRNRAVAS 90
>SB_4956| Best HMM Match : ThiF (HMM E-Value=0)
Length = 213
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 324 LGHDAMRRMASSDVLISGLGGLGVEIAKNVIL 419
LG ++ +S +L+ G GG+G E+ KN++L
Sbjct: 13 LGGSLADKVNNSKILVVGAGGIGCELLKNLVL 44
>SB_48047| Best HMM Match : Phage_QLRG (HMM E-Value=5.3)
Length = 418
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 439 LPTXHHPRITFFAISTPKPPRPDIRTSELAI--RRIASWPST*SW 311
+PT P I ISTPKP P TS +I RR ++ P T SW
Sbjct: 261 IPTQKRP-IDITRISTPKPRTPVKNTSSYSIPSRRQSAIPMTNSW 304
>SB_22173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 324 LGHDAMRRMASSDVLISGLGGLGVEIAKNVIL 419
LG ++ +S +L+ G GG+G E+ KN++L
Sbjct: 13 LGGSLADKVNNSKILVVGAGGIGCELLKNLVL 44
>SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19)
Length = 1883
Score = 29.9 bits (64), Expect = 2.8
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = -1
Query: 526 KPCSDQLQ-SLKGRTARKDQPRCNFCRHAKLPTXHHPRITFFAISTPKPPRPDIRTSELA 350
KPCS S RT DQ + HA PT + RI + S P +TSE
Sbjct: 1485 KPCSASASPSNTYRTQNTDQVKSGSSIHA--PTSNEDRIKAVSSSAMAP-----KTSERF 1537
Query: 349 IRRIASWPST*SWREYRLSSISSSTRAP 266
+ S + ++R+ ++SSS +AP
Sbjct: 1538 TTKPGSSIDAPTGNKHRIKAVSSSVKAP 1565
>SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5)
Length = 754
Score = 29.9 bits (64), Expect = 2.8
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = -1
Query: 526 KPCSDQLQ-SLKGRTARKDQPRCNFCRHAKLPTXHHPRITFFAISTPKPPRPDIRTSELA 350
KPCS S RT DQ + HA PT + RI + S P +TSE
Sbjct: 356 KPCSASASPSNTYRTQNTDQVKSGSSIHA--PTSNEDRIKAVSSSAMAP-----KTSERF 408
Query: 349 IRRIASWPST*SWREYRLSSISSSTRAP 266
+ S + ++R+ ++SSS +AP
Sbjct: 409 TTKPGSSIDAPTGNKHRIKAVSSSVKAP 436
>SB_48254| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 1414
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 156 CPMSSAEVADNSVDPPAKKRKLN 224
CP+S ++V+D VD P K+RK++
Sbjct: 1083 CPLSPSDVSDVYVDCPNKRRKIS 1105
>SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 144 CARSCPMSSAEVADNSVDPPAKKRKLNT 227
C+ S SS E + S +PP+KKR + T
Sbjct: 451 CSESTAASSGEKVEGSTEPPSKKRVVPT 478
>SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 186 NSVDPPAKKRKLNTGEAHSNNSAMANNGARVEDEIDESLYSRQLY 320
NS D P ++ LN EAHS S GA+ + + +S ++Q +
Sbjct: 498 NSNDTPTEQ-PLNMKEAHSKKSTATKKGAKSKSKATKSKRAKQTF 541
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 433 TXHHPRITFFAISTPKPPRPDIRTSELAIR 344
T HH T +TP P PD+ T+ LA++
Sbjct: 1141 TCHHTNRTATPATTPGVPTPDLATAALALQ 1170
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 433 TXHHPRITFFAISTPKPPRPDIRTSELAIR 344
T HH T +TP P PD+ T+ LA++
Sbjct: 1509 TCHHTNRTATPATTPGVPTPDLATAALALQ 1538
>SB_17285| Best HMM Match : rve (HMM E-Value=1.3e-16)
Length = 560
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 433 TXHHPRITFFAISTPKPPRPDIRTSELAIR 344
T HH T +TP P PD+ T+ LA++
Sbjct: 479 TCHHTNRTATPATTPGVPTPDLATAALALQ 508
>SB_576| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1444
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -1
Query: 448 HAKLPTXHH--PRITFFAISTPKPPRPDIRTSELAIRRIASWPST*SWREYRLSSISSST 275
H L T H TF+A + P R +LA+ R++SW S E L+ S T
Sbjct: 889 HLSLVTCHQYADDTTFYAHAKPCDISDCERRLQLALDRLSSWSS-----ECNLTLNSKKT 943
Query: 274 RAPLFAIAEL 245
+ LF+ A++
Sbjct: 944 KTMLFSAAQM 953
>SB_48617| Best HMM Match : Drf_FH1 (HMM E-Value=3.7)
Length = 477
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 433 TXHHPRITFFAISTPKPPRPDIRTSELAIR 344
T HH T +TP P PD+ T+ LA++
Sbjct: 219 TCHHTNRTATPATTPGVPTPDLATAALALQ 248
>SB_36929| Best HMM Match : rve (HMM E-Value=1.2e-16)
Length = 913
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 433 TXHHPRITFFAISTPKPPRPDIRTSELAIR 344
T HH T +TP P PD+ T+ LA++
Sbjct: 843 TCHHTNRTATPATTPGVPTPDLATAALALQ 872
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 433 TXHHPRITFFAISTPKPPRPDIRTSELAIR 344
T HH T +TP P PD+ T+ LA++
Sbjct: 1485 TCHHTNRTATPATTPGVPTPDLATAALALQ 1514
>SB_6960| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 229
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -1
Query: 448 HAKLPTXHH--PRITFFAISTPKPPRPDIRTSELAIRRIASWPST*SWREYRLSSISSST 275
H L T H TF+A + P R +LA+ R++SW S E L+ S T
Sbjct: 131 HLSLVTCHQYADDTTFYAHAKPCDISDCERRLQLALDRLSSWSS-----ECNLTLNSKKT 185
Query: 274 RAPLFAIAEL 245
+ LF+ A++
Sbjct: 186 KTMLFSAAQM 195
>SB_2890| Best HMM Match : rve (HMM E-Value=0.044)
Length = 336
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 433 TXHHPRITFFAISTPKPPRPDIRTSELAIR 344
T HH T +TP P PD+ T+ LA++
Sbjct: 255 TCHHTNRTATPATTPGVPTPDLATAALALQ 284
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,212,071
Number of Sequences: 59808
Number of extensions: 502400
Number of successful extensions: 1561
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2503194881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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