Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_G16
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 84 1e-16
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 83 3e-16
Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical pr... 35 0.066
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 34 0.15
Z82096-6|CAD98732.2| 124|Caenorhabditis elegans Hypothetical pr... 32 0.47
U60979-2|AAC47278.1| 119|Caenorhabditis elegans CES-2 region pi... 32 0.47
U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membran... 32 0.47
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 32 0.62
AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical ... 31 1.1
U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula (ubiq... 31 1.4
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 30 1.9
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 30 1.9
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z74038-8|CAD21642.1| 540|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z72507-16|CAC35887.1| 540|Caenorhabditis elegans Hypothetical p... 29 3.3
AF047661-1|AAK71388.2| 915|Caenorhabditis elegans Hypothetical ... 29 3.3
U80026-3|AAC25845.2| 354|Caenorhabditis elegans Hypothetical pr... 29 4.3
U21320-6|AAA62538.4| 234|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 84.2 bits (199), Expect = 1e-16
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Frame = +3
Query: 228 GEAHSNNSAMANNGARVEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAK 407
GE ++ G ++ +D++LYSRQ+Y LG AM + ++ VLISGLG +GVEIAK
Sbjct: 83 GEKMDTSNNAGGVGGNSDELLDKNLYSRQIYTLGESAMVNLRTASVLISGLGSVGVEIAK 142
Query: 408 NVILGWCXVGNFA*RQKLHRG*SFLAVLPFRDCN-WSEQGFNIVRTLSELNHYVPTTAYT 584
N+ILG KL + A RD + + + L+ELN V T
Sbjct: 143 NLILGGVRHVTIH-DTKLAKWSDLSAQYYLRDADVGHNRATSCYERLAELNDSVNVQVST 201
Query: 585 GPLTEDFWRKFRVVVLTGASWAXXXXXXAFLXPNNIXWVIADTKXLF 725
LTE+F + F +VVLT A+ A+ +N +I D + +F
Sbjct: 202 DELTEEFVKTFDLVVLTDAARTAQRQIAAWTRAHNRRILITDARGVF 248
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 83.0 bits (196), Expect = 3e-16
Identities = 58/163 (35%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Frame = +3
Query: 240 SNNSAMANNGARVEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVIL 419
SNN+ G ++ +D++LYSRQ+Y LG AM + ++ VLISGLG +GVEIAKN+IL
Sbjct: 4 SNNAGGV--GGNSDELLDKNLYSRQIYTLGESAMVNLRTASVLISGLGSVGVEIAKNLIL 61
Query: 420 GWCXVGNFA*RQKLHRG*SFLAVLPFRDCN-WSEQGFNIVRTLSELNHYVPTTAYTGPLT 596
G KL + A RD + + + L+ELN V T LT
Sbjct: 62 GGVRHVTIH-DTKLAKWSDLSAQYYLRDADVGHNRATSCYERLAELNDSVNVQVSTDELT 120
Query: 597 EDFWRKFRVVVLTGASWAXXXXXXAFLXPNNIXWVIADTKXLF 725
E+F + F +VVLT A+ A+ +N +I D + +F
Sbjct: 121 EEFVKTFDLVVLTDAARTAQRQIAAWTRAHNRRILITDARGVF 163
>Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical
protein C08B6.9 protein.
Length = 343
Score = 35.1 bits (77), Expect = 0.066
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 291 DESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVIL 419
++++Y RQ+ + G +A ++ +S VLI G LG E+AK + L
Sbjct: 7 EQAIYDRQIRLWGMEAQNKIRNSKVLIIGGKQLGAEVAKTLSL 49
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 498 RDCNWSEQGFNIVRTLSELNHYVPTTAYTGPLTEDFWR-KFRVVVLTGASW 647
RD N G I ++ NHYV A+ ++ED+WR K VV+ G ++
Sbjct: 219 RDANDITNGGEITLCETDPNHYVGNIAWEPLVSEDYWRIKLASVVIDGTTY 269
>Z82096-6|CAD98732.2| 124|Caenorhabditis elegans Hypothetical
protein ZK909.6 protein.
Length = 124
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 141 NCARSCPMS-SAEVADNSVDPPAKKRKLNTGEAHSNNSAMANNGARVEDEIDESLY 305
N +SC +AE ++ PP+ L T A S N NG V+D ++ +Y
Sbjct: 63 NIRKSCVQKQNAEKSEEETSPPSSDADLPTSLADSFNDTTPYNGTIVDDRMEVKIY 118
>U60979-2|AAC47278.1| 119|Caenorhabditis elegans CES-2 region
pioneer protein.
Length = 119
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 141 NCARSCPMS-SAEVADNSVDPPAKKRKLNTGEAHSNNSAMANNGARVEDEIDESLY 305
N +SC +AE ++ PP+ L T A S N NG V+D ++ +Y
Sbjct: 58 NIRKSCVQKQNAEKSEEETSPPSSDADLPTSLADSFNDTTPYNGTIVDDRMEVKIY 113
>U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membrane
ruffles in embryoprotein 1 protein.
Length = 430
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 294 ESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVIL 419
+S Y +V G + + ++ +L+ G GGLG E+ KN+ L
Sbjct: 22 DSAYKVPWFVPGPENFEALQNTKILVIGAGGLGCELLKNLAL 63
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily
assigned gene nameprotein 162 protein.
Length = 2643
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 193 LTPRRKSGN*IQEKRIRTTRQWRTMERAWKMKSTRVCTRASSTCLATTLCVG 348
+TP+RK GN + +I +R E AWK K +C A + +C+G
Sbjct: 517 VTPQRKQGN--ENIQILEVLHFRRNEHAWKNKGKNICKAA----MCDDMCIG 562
>AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical
protein F42G8.6 protein.
Length = 402
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 291 DESLYSRQLYV--LGHDAMRRMASSDVLISGLGGLGVEIAKNVILGWCXVG 437
D YSRQL V G + + + +VLI G GGLG +A LG +G
Sbjct: 14 DAGRYSRQLLVDDFGVSGQKNLKNLNVLIVGAGGLGCPVA--TYLGAAGIG 62
>U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula
(ubiquitin activating)homolog protein 1 protein.
Length = 541
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 406 KTLSLGGVXSVTLHDDKNCTVADLSSQFYLSETVIGQNKALTSCE 540
K+L L GV S + DD AD+ F+L IG+++A + E
Sbjct: 44 KSLVLAGVQSFYVVDDAKVEQADIGQNFFLHADDIGRSRAEATLE 88
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical
protein C41C4.4 protein.
Length = 967
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 218 TKYRRSAFEQLGNGEQWSARGR*NRRESVLAPALRAWP-RRYAS 346
T+YR S F++ G+ W+A N + L P + WP + YAS
Sbjct: 171 TEYRVSMFDEKNRGKTWNATF--NDYSAHLLPEVNTWPFKHYAS 212
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 218 TKYRRSAFEQLGNGEQWSARGR*NRRESVLAPALRAWP-RRYAS 346
T+YR S F++ G+ W+A N + L P + WP + YAS
Sbjct: 171 TEYRVSMFDEKNRGKTWNATF--NDYSAHLLPEVNTWPFKHYAS 212
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 201 PAKKRKLNTGEAHSNNSAMANNGARVEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGL 380
P + +LN +AHSNNS + + GA E+ + E + +R+ L D MA D + G+
Sbjct: 237 PVECSELNKNDAHSNNSRL-HIGAD-EEVVQEDVTARK--QLFFDVFSNMADFDNTLVGM 292
Query: 381 G 383
G
Sbjct: 293 G 293
>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical
protein C45G3.1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = -1
Query: 442 KLPTXHHPRITFFAISTPKPPRPDIRTSELAIRRIASWPST*SWREYRLSSISSSTR-AP 266
+L H R+ S K + D+R +E A + S P++ + R SISSS +P
Sbjct: 15 RLANRHEKRLLDQVKSNTK--KIDLRATERAF--LESSPTSMNMRTPLNPSISSSVSDSP 70
Query: 265 LFAIAELFECASPVFSFRFFAGGSTELSATSALDIGHERAQFCQN 131
+ + E + + + + EL + +D+G +A+ C+N
Sbjct: 71 ILSYDE--KANKQIIALATWCNTMMELDVSEEMDLGESKAEACRN 113
>Z74038-8|CAD21642.1| 540|Caenorhabditis elegans Hypothetical
protein F17C11.12 protein.
Length = 540
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 286 SSSTRAPLFAIAELFECASPVFSFRFFAGGSTELSATSALDIGHERAQFCQNFGCV 119
+++T + L I L CA + + S EL T+ I + AQ C FG V
Sbjct: 417 TTATFSVLIRIGVLLSCAMTSQAIIVASIASNELMPTAIRSISYSTAQLCSRFGIV 472
>Z72507-16|CAC35887.1| 540|Caenorhabditis elegans Hypothetical
protein F17C11.12 protein.
Length = 540
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 286 SSSTRAPLFAIAELFECASPVFSFRFFAGGSTELSATSALDIGHERAQFCQNFGCV 119
+++T + L I L CA + + S EL T+ I + AQ C FG V
Sbjct: 417 TTATFSVLIRIGVLLSCAMTSQAIIVASIASNELMPTAIRSISYSTAQLCSRFGIV 472
>AF047661-1|AAK71388.2| 915|Caenorhabditis elegans Hypothetical
protein M70.3a protein.
Length = 915
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = -2
Query: 306 STDSRRFHLPRALHCSPLPSCSNALLLYLVSAFSPGGQRNYRRLQH*TSGTNAHNFAR 133
S+ S F S + SNA + + S SP Q + H T +NAHN R
Sbjct: 20 SSGSAPFKQSETAKTSDFTAFSNAHNIIIASGSSPSKQSETAKTSHFTDFSNAHNVIR 77
>U80026-3|AAC25845.2| 354|Caenorhabditis elegans Hypothetical
protein EGAP9.3 protein.
Length = 354
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 544 SVRTMLKPCSDQLQSLKGRTARKDQPRCNFCRHAK 440
S+R LKP D+ LK RKD+ R C H +
Sbjct: 176 SIRKWLKPPQDEEMFLKKMIRRKDELRYKHCVHIR 210
>U21320-6|AAA62538.4| 234|Caenorhabditis elegans Hypothetical
protein K04G7.11 protein.
Length = 234
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 498 RDCNWSEQGFNIVRTLSELNHYVPTTAYTGPLTED 602
R+C EQ + TL NHY PTTA LT+D
Sbjct: 143 RECVGGEQFYPTADTLIHGNHY-PTTAAMDKLTKD 176
>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
protein F59F3.5 protein.
Length = 1199
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 199 PRRKSGN*IQEKRIRTTRQWRTMERAWKMKSTRVCTRASSTCLA 330
P+R+ E IRT+ +W+ E + +K+ R C S C++
Sbjct: 66 PKREEHAGFPEIGIRTSAEWKKNEYWFLLKNVRQCDTGSYYCVS 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,384,913
Number of Sequences: 27780
Number of extensions: 363798
Number of successful extensions: 930
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -