Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G15
         (878 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0PGI9 Cluster: Farnesoic acid O-methyltransferase; n=2...    37   0.59 
UniRef50_Q89US4 Cluster: Bll1337 protein; n=1; Bradyrhizobium ja...    35   3.1  
UniRef50_A7PE13 Cluster: Chromosome chr11 scaffold_13, whole gen...    34   4.1  
UniRef50_Q9KNA2 Cluster: Protease II; n=17; Vibrio cholerae|Rep:...    33   7.2  
UniRef50_A6L7A6 Cluster: Glycosyltransferase family 2; n=1; Bact...    33   9.6  

>UniRef50_A0PGI9 Cluster: Farnesoic acid O-methyltransferase; n=24;
           Decapoda|Rep: Farnesoic acid O-methyltransferase -
           Penaeus monodon (Penoeid shrimp)
          Length = 280

 Score = 37.1 bits (82), Expect = 0.59
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +3

Query: 438 TPNIISNSEYRQFSISWSKNGVCLGQNGELEPIMKLECKE 557
           TP+I+S  EYR+F +++  + + +G+ GE EP M     E
Sbjct: 78  TPDILSEEEYREFWVAFDHDVIRVGKGGEWEPFMSATIPE 117


>UniRef50_Q89US4 Cluster: Bll1337 protein; n=1; Bradyrhizobium
           japonicum|Rep: Bll1337 protein - Bradyrhizobium
           japonicum
          Length = 915

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +3

Query: 339 GLAKEAGMKCDYWVVLGDRSF---IHAPNSGIQFAHTPNIISNSEYRQFSISWSKNGVCL 509
           GLA E G K   WV + D  F   I +  +G   + TP+ ++    RQF  +W +  V +
Sbjct: 687 GLAVEKGRKYRVWVEIEDPWFDRTIMSGTNGFMTSFTPHYLALPTLRQFGAAWFQPVVRI 746

Query: 510 GQNG 521
           G  G
Sbjct: 747 GTKG 750


>UniRef50_A7PE13 Cluster: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence; n=4; Vitis vinifera|Rep: Chromosome
           chr11 scaffold_13, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 797

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = +3

Query: 411 PNSGIQFAHT-PNIISNSEYRQFSISWSKNGVCLGQNGELEPIMKLECKEQN-FNYFTFS 584
           P++ +Q  HT P ++S  E    S+S S NGV         P + L  +E+N F+    S
Sbjct: 8   PSTHLQSTHTSPALLSPLELFLDSMSMSINGVSPSFQSFRPPTLPLPVEEENPFSILGES 67

Query: 585 MHRSIAPAHWR 617
            H  +AP HW+
Sbjct: 68  RH-VLAPPHWK 77


>UniRef50_Q9KNA2 Cluster: Protease II; n=17; Vibrio cholerae|Rep:
           Protease II - Vibrio cholerae
          Length = 665

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 14/54 (25%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = +3

Query: 447 IISNSEYRQFSISWSKNGVCLGQNGELEPIMKLECKEQNFNYF---TFSMHRSI 599
           I +N +Y     +  ++ V +G  G++EP++ L  + + F+Y+   ++S+ RS+
Sbjct: 80  IYANQQYNDIQWNGHRHIVKIGAQGQIEPLLNLSARAEPFDYYQLASWSLDRSV 133


>UniRef50_A6L7A6 Cluster: Glycosyltransferase family 2; n=1;
           Bacteroides vulgatus ATCC 8482|Rep: Glycosyltransferase
           family 2 - Bacteroides vulgatus (strain ATCC 8482 / DSM
           1447 / NCTC 11154)
          Length = 271

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 327 NAAVGLAKEAGMKCDYWVVLGDRSFIHAPNSGIQFAH 437
           + ++ + KE   K DYWV   D+   HA N G+  AH
Sbjct: 45  DGSIEVIKEYAGKVDYWVSEPDKGIYHAMNKGVLQAH 81


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,209,700
Number of Sequences: 1657284
Number of extensions: 13089779
Number of successful extensions: 27139
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27132
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)