Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G15
         (878 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.45 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.2  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   5.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   7.3  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   7.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 100  FYEXYKITSRQEPGLKSSLGRGGWGD 23
            FY+  ++T  +  G+K SL  GGW D
Sbjct: 1457 FYK--RVTGYKAKGIKVSLALGGWND 1480



 Score = 25.4 bits (53), Expect = 0.59
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 100  FYEXYKITSRQEPGLKSSLGRGGWGD 23
            FYE  K+T+ +  G+K  +  GGW D
Sbjct: 1882 FYE--KVTAYKSKGIKVLVAIGGWND 1905



 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 100  FYEXYKITSRQEPGLKSSLGRGGWGD 23
            FY+  K+ S +  G+K  +  GGW D
Sbjct: 2380 FYK--KVVSYKSRGVKVLIALGGWND 2403


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 97  YEXYKITSRQEPGLKSSLGRGGW 29
           YE  +   +  P LK+ L  GGW
Sbjct: 148 YERIQKLKKANPSLKTLLAIGGW 170


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -2

Query: 568 LKFCSLHSSFIMGSNSPFWPKHTPFLDH 485
           L+ C+L     + + +P++P+H   LD+
Sbjct: 178 LEHCTLIGEDNISAKNPWFPRHASDLDN 205


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 567 NYFTFSMHRSIAPAHWRFECKYLTRI 644
           N +     R+  P +W F C +L  I
Sbjct: 652 NGYVIFRFRADNPGYWLFHCHFLFHI 677


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 738 HHHQVGYIAG 709
           HHHQ G +AG
Sbjct: 14  HHHQSGSVAG 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,095
Number of Sequences: 336
Number of extensions: 3704
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)