Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G15
         (878 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.93 
SB_22184| Best HMM Match : PHD (HMM E-Value=0.00011)                   30   2.1  
SB_51815| Best HMM Match : RVT_1 (HMM E-Value=0.23)                    29   5.0  
SB_30484| Best HMM Match : Ded_cyto (HMM E-Value=0)                    29   5.0  
SB_14794| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.6  
SB_12447| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.6  

>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1300

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +3

Query: 705 SSQLCIPLGGGVSFPYFTPSSTS--LGLRHPHQQHCIPFCPS 824
           +S LC+P   G S  + T   T+  LGL H + + C+P CPS
Sbjct: 667 ASGLCLPCQSGCSACHVTGQCTACMLGL-HLYNKTCVPSCPS 707


>SB_22184| Best HMM Match : PHD (HMM E-Value=0.00011)
          Length = 634

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -3

Query: 852 PRXRWKDVVXKDKRECNVADEDVEDRAKWR 763
           PR  W +V+ +D +   +   D +DR +W+
Sbjct: 590 PRKNWHEVLREDLKLAGLTPHDTQDRVRWK 619


>SB_51815| Best HMM Match : RVT_1 (HMM E-Value=0.23)
          Length = 297

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 626 TFKPPVCRCYTSVHRKCEIIKILF 555
           +F  PV RCYT V ++C I   LF
Sbjct: 223 SFLTPVFRCYTGVKQRCMISPTLF 246


>SB_30484| Best HMM Match : Ded_cyto (HMM E-Value=0)
          Length = 1025

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
 Frame = +3

Query: 291 NSSSINFEVKAD-NAAVGLAKEAGMKCDYWVVLGDRSFIHAPNSGIQFAH-TPNIISNSE 464
           N ++ + E+K D  AA+ +   A +  +Y  ++ D+ F+  P   + F   +PN++  S 
Sbjct: 15  NMAAKHGELKNDVEAALCIVHAAALVSEYLSMMEDKRFL--PVGCVAFEKISPNVLEESA 72

Query: 465 YRQFSISWSKNGVCLGQ 515
                +S  + G+C G+
Sbjct: 73  VSDDVVSPDEEGICTGK 89


>SB_14794| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 95

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 534 IMKLECKEQNFNYF-TFSMHRSIAPAHWRFECKYLT 638
           ++K  CK+ NFN F  F++   ++  H    C++LT
Sbjct: 24  VLKKACKDNNFNIFLDFNVKEFLSTDHSHAFCRHLT 59


>SB_12447| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 326

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/45 (24%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
 Frame = +3

Query: 435 HTPNIISNSEYRQFSISW-SKNGVCLGQNGELE--PIMKLECKEQ 560
           H PN++SN++   F   + +++ +C+G++G++    +M++  K++
Sbjct: 16  HLPNVLSNADKEDFFKHFGARSVICMGRSGKMSCFAVMRMSPKKE 60


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,342,214
Number of Sequences: 59808
Number of extensions: 410028
Number of successful extensions: 981
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2502612210
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)