Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G14
         (912 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4RLQ7 Cluster: Chromosome 10 SCAF15019, whole genome s...    33   7.7  
UniRef50_Q54SP2 Cluster: Actin-binding protein; n=2; Dictyosteli...    33   7.7  

>UniRef50_Q4RLQ7 Cluster: Chromosome 10 SCAF15019, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10
           SCAF15019, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 579

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = +1

Query: 499 PXPXXXGGGXXXPXXPPXPXXXXXXXXXXXGXXXXXXPPPPPP 627
           P P   GGG   P  PP P                  PPPPPP
Sbjct: 394 PPPPLPGGGPPPPPPPPPPPGLPGAGPPPPPPPPGCGPPPPPP 436


>UniRef50_Q54SP2 Cluster: Actin-binding protein; n=2; Dictyostelium
           discoideum|Rep: Actin-binding protein - Dictyostelium
           discoideum AX4
          Length = 1126

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = +1

Query: 499 PXPXXXGGGXXXPXXPPXPXXXXXXXXXXXGXXXXXXPPPPPP 627
           P P   GGG   P  PP P                  PPPPPP
Sbjct: 553 PAPPVSGGGPPPPPPPPPPSSGGGPPPPPPPPSSGGPPPPPPP 595


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 399,710,735
Number of Sequences: 1657284
Number of extensions: 6445787
Number of successful extensions: 29448
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25477
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)