SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G11
         (895 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R...   178   1e-43
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110...   161   2e-38
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar...   158   2e-37
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka...   149   7e-35
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ...   147   3e-34
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob...   124   2e-27
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso...   122   9e-27
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=...   119   1e-25
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie...   117   5e-25
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote...   115   2e-24
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso...   111   2e-23
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n...   110   4e-23
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T...   110   5e-23
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar...   104   4e-21
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ...   102   1e-20
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo...    98   3e-19
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell...    79   2e-13
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re...    67   7e-10
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot...    60   7e-08
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n...    56   1e-06
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar...    54   5e-06
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot...    54   6e-06
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R...    48   4e-04
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth...    36   1.1  
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:...    34   5.6  

>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
           Ribosomal protein S26 - Pectinaria gouldii (Trumpet
           worm) (Ice-cream cone worm)
          Length = 109

 Score =  178 bits (434), Expect = 1e-43
 Identities = 83/109 (76%), Positives = 92/109 (84%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 271
           MT+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASVY 
Sbjct: 1   MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYE 60

Query: 272 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIRTPPKSNFPRDMSRP 418
            + LPKLYAKLHYCVSCAIHSKVVRNRS+  R+ RTPP    P  M +P
Sbjct: 61  GYPLPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109


>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
           Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
           1 - Homo sapiens (Human)
          Length = 115

 Score =  161 bits (391), Expect = 2e-38
 Identities = 73/98 (74%), Positives = 82/98 (83%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 271
           MT+KRRN   AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+ 
Sbjct: 1   MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60

Query: 272 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIRTPP 385
            + LPKLY KLHYCVSCAIHSKVVRNRS+   + RTPP
Sbjct: 61  AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98


>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
           Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 133

 Score =  158 bits (384), Expect = 2e-37
 Identities = 71/113 (62%), Positives = 85/113 (75%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 271
           MT KRRNGGR KH RGHV  +RC+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY 
Sbjct: 1   MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60

Query: 272 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIRTPPKSNFPRDMSRPQAVQ 430
            + LPKLYAK  YCVSCAIHS VVR RS+ +RR+RTPP     R    P+  Q
Sbjct: 61  GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113


>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
           Eukaryota|Rep: 40S ribosomal protein S26-A -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 119

 Score =  149 bits (362), Expect = 7e-35
 Identities = 65/99 (65%), Positives = 81/99 (81%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 271
           M +KR + GR K GRGHVK VRC NC++ +PKDKAIK+  IRNIVEAAAVRD+++ASVYP
Sbjct: 1   MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60

Query: 272 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIRTPPK 388
            + LPK Y KLHYCVSCAIH+++VR RS+ DR+ R PP+
Sbjct: 61  EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99


>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
           Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
           protein S26 - Entamoeba histolytica HM-1:IMSS
          Length = 147

 Score =  147 bits (357), Expect = 3e-34
 Identities = 69/113 (61%), Positives = 85/113 (75%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 271
           MT KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S   
Sbjct: 1   MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALT 60

Query: 272 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIRTPPKSNFPRDMSRPQAVQ 430
            ++LPK Y KL YCVSC IH +VVR RS+ DRR R PPK    +  ++ QAV+
Sbjct: 61  KYKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112


>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
           obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
           (Moth)
          Length = 82

 Score =  124 bits (300), Expect = 2e-27
 Identities = 56/71 (78%), Positives = 63/71 (88%)
 Frame = +2

Query: 221 IVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIRTPPKSNFP 400
           +++   +RDIN+ASVY  FQLPKLYAKLHYCVSCAIHSKVVRNRSK DRRIRTPPK+ FP
Sbjct: 11  LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFP 70

Query: 401 RDMSRPQAVQR 433
           RDM+RPQ VQR
Sbjct: 71  RDMARPQNVQR 81


>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
           protein S26-2, partial; n=4; Pan troglodytes|Rep:
           PREDICTED: similar to 40S ribosomal protein S26-2,
           partial - Pan troglodytes
          Length = 196

 Score =  122 bits (295), Expect = 9e-27
 Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
 Frame = +2

Query: 107 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLP 286
           RN  RAK G  H++ +RCTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++ASV+  + LP
Sbjct: 1   RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60

Query: 287 K--LYAKLHYCVSCAIHSKVVRNRSKXDRRIRTPPKSNFPRDMSRPQ 421
           K  LY KL+YCV CAIH KVVRN      + +T P    P   + PQ
Sbjct: 61  KLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAPQ 107


>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
           Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
           putative - Trichomonas vaginalis G3
          Length = 118

 Score =  119 bits (286), Expect = 1e-25
 Identities = 52/97 (53%), Positives = 69/97 (71%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 271
           M  KRRN GR+K  RGH + V C NC R VPKDKAI +F I+N+V+A++ +D++DA +Y 
Sbjct: 1   MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQ 60

Query: 272 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIRTP 382
            ++LPK Y K +YCVSCA+H  VVR R+   RR R P
Sbjct: 61  GYELPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVP 97


>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
           nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
          Length = 125

 Score =  117 bits (281), Expect = 5e-25
 Identities = 60/113 (53%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 271
           M  KRRN GR K  +GH   VRCTNC R V KDKAIK+F  RN+V+A++ RDI +   Y 
Sbjct: 1   MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60

Query: 272 M--FQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIRTPPKSNFPRDMSRPQA 424
              F +PK+Y KL YCVSCAIH+++VR RS  DRR R   K    R   RP+A
Sbjct: 61  QSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110


>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
           n=12; Alveolata|Rep: Ribosomal protein S26e containing
           protein - Tetrahymena thermophila SB210
          Length = 197

 Score =  115 bits (276), Expect = 2e-24
 Identities = 53/103 (51%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 271
           M  KRRN GR++  RGH + V CTNC R V KDKA+K++ +R++V+ ++ RDI     + 
Sbjct: 79  MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFE 138

Query: 272 MFQ--LPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIRTPPKSN 394
             +  +PKLY KL YC+SCAIHS+VVR R   DRRIR PP  N
Sbjct: 139 NEKQGIPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181


>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
           protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
           PREDICTED: similar to 40S ribosomal protein S26 isoform
           3 - Canis familiaris
          Length = 118

 Score =  111 bits (268), Expect = 2e-23
 Identities = 50/59 (84%), Positives = 56/59 (94%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 268
           MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1   MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59


>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
           Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
           Rattus norvegicus
          Length = 107

 Score =  110 bits (265), Expect = 4e-23
 Identities = 54/87 (62%), Positives = 65/87 (74%)
 Frame = +2

Query: 122 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 301
           AK G GHV+ V C + A C+PKDKAIK F+I+NI+EAAAVRDI+ A+V+  + LP LY K
Sbjct: 12  AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70

Query: 302 LHYCVSCAIHSKVVRNRSKXDRRIRTP 382
           LHYCVSCAIHS+VVRN     RR   P
Sbjct: 71  LHYCVSCAIHSEVVRNHLLKLRRTEHP 97


>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
           Trypanosomatidae|Rep: Ribosomal protein s26, putative -
           Leishmania major
          Length = 112

 Score =  110 bits (264), Expect = 5e-23
 Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 4/106 (3%)
 Frame = +2

Query: 92  MTRKRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS- 262
           MT KRRN GR+K  H RG VK + C NC R  PKDKA+ +FV+R +++AA+ RD+ +AS 
Sbjct: 1   MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASP 60

Query: 263 VY-PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIRTPPKSNF 397
           VY   F +PKLY K  +C++CAIHS+ VR R   +R+IR   K  F
Sbjct: 61  VYGANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106


>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
           theta|Rep: 40S ribosomal protein S26 - Guillardia theta
           (Cryptomonas phi)
          Length = 98

 Score =  104 bits (249), Expect = 4e-21
 Identities = 45/95 (47%), Positives = 68/95 (71%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 271
           MT+KRRN GR+K  RG V+ + C    + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y 
Sbjct: 1   MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYE 60

Query: 272 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIR 376
            + +PKLY K  + +  AIH+++VR RSK DR+ R
Sbjct: 61  YYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95


>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
           Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
           Ostreococcus tauri
          Length = 221

 Score =  102 bits (244), Expect = 1e-20
 Identities = 45/82 (54%), Positives = 62/82 (75%)
 Frame = +2

Query: 143 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 322
           VK V C +    VPKDKA+++F++RNIVE+AA+RD+ ++  +  + LPKLY K++Y +S 
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186

Query: 323 AIHSKVVRNRSKXDRRIRTPPK 388
           AIHSKVVR RS+  RRIR PPK
Sbjct: 187 AIHSKVVRVRSREARRIRDPPK 208


>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
           Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
           Encephalitozoon cuniculi
          Length = 105

 Score = 97.9 bits (233), Expect = 3e-19
 Identities = 41/91 (45%), Positives = 62/91 (68%)
 Frame = +2

Query: 104 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL 283
           RRN GR K  RG   +++C  C    PKDKAIK+F I++++E A+  D+  A++Y +F++
Sbjct: 2   RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61

Query: 284 PKLYAKLHYCVSCAIHSKVVRNRSKXDRRIR 376
           P++  K  +CVSCA H+K+VR RS   R+IR
Sbjct: 62  PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92


>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
           natans|Rep: Ribosomal protein S26 - Bigelowiella natans
           (Pedinomonas minutissima) (Chlorarachnion sp.(strain
           CCMP 621))
          Length = 98

 Score = 78.6 bits (185), Expect = 2e-13
 Identities = 36/94 (38%), Positives = 56/94 (59%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 271
           M +KRRN GR+K+ RGHV  + C +    VP+DKAIKK  ++++     ++D  +  V P
Sbjct: 1   MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLP 60

Query: 272 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRI 373
            ++ PKLY+ + Y +S A   K ++   K  RRI
Sbjct: 61  GYKAPKLYSYVFYSISSAFSQKFIKPGRKKYRRI 94


>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
           repeat domain protein 11 (Ankyrin repeat-containing
           cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
           similar to Ankyrin repeat domain protein 11 (Ankyrin
           repeat-containing cofactor 1) - Rattus norvegicus
          Length = 682

 Score = 66.9 bits (156), Expect = 7e-10
 Identities = 33/57 (57%), Positives = 40/57 (70%)
 Frame = +2

Query: 134 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKL 304
           R +V+ +   NC + +PKDKA KKFV RNIVEAAAVRDI +A+V     LPK Y KL
Sbjct: 34  RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90


>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
           Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
           maquilingensis IC-167
          Length = 152

 Score = 60.1 bits (139), Expect = 7e-08
 Identities = 31/108 (28%), Positives = 55/108 (50%)
 Frame = +2

Query: 98  RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 277
           +KR+N GR K  +G    V C NC + +P+ KA++  V  + +     +++         
Sbjct: 7   KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI--- 63

Query: 278 QLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIRTPPKSNFPRDMSRPQ 421
            +P+ Y    YCV+CAI+  +++ RS+ +R+ + P      R   RPQ
Sbjct: 64  -VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP----ILRGQQRPQ 106


>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
           Rattus norvegicus
          Length = 70

 Score = 56.0 bits (129), Expect = 1e-06
 Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
 Frame = +2

Query: 98  RKRRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 268
           R RR+ G+ K GR  G +  V+   N   C+ KDKA  KFVI+NIVEAAA+R        
Sbjct: 3   RMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR-------- 53

Query: 269 PMFQLPKLYAKLHYCVSCAIHSKV 340
                   Y KLH CVSCAIH KV
Sbjct: 54  -------FYVKLHCCVSCAIHIKV 70


>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
           Crenarchaeota|Rep: 30S ribosomal protein S26e -
           Aeropyrum pernix
          Length = 95

 Score = 54.0 bits (124), Expect = 5e-06
 Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI-NDASVY 268
           M +KR + GR K  +G    V+C NC R VP DKAI    + + V+     ++    ++ 
Sbjct: 1   MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAII 60

Query: 269 PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRR 370
             + + K      YCVSCA+H  +V+ R +  R+
Sbjct: 61  MRYPVTKC-----YCVSCAVHYGIVKIRPEEQRK 89


>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
           Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
           aerophilum
          Length = 98

 Score = 53.6 bits (123), Expect = 6e-06
 Identities = 25/97 (25%), Positives = 49/97 (50%)
 Frame = +2

Query: 92  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 271
           M +KR+N GR K  +G    + C NC + +P+ KA++  V  + V     R++       
Sbjct: 1   MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI- 59

Query: 272 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKXDRRIRTP 382
              + +      YC++CA+   +++ RS+ +R+ + P
Sbjct: 60  ---ISRYLVTKTYCINCAVFFGIIKVRSREERKKKIP 93


>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
           Similarity - Kluyveromyces lactis (Yeast) (Candida
           sphaerica)
          Length = 157

 Score = 47.6 bits (108), Expect = 4e-04
 Identities = 33/100 (33%), Positives = 48/100 (48%)
 Frame = -1

Query: 391 TLGRSTDSSVXLRSVPDNFAVDGA*HAXXXXXXXXXXXEHWVYRGIVNISDRRRFYDVPN 212
           +L RS+DSSV   S  +N +VD A +               V RG   ISD   F DV +
Sbjct: 30  SLWRSSDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSD 89

Query: 211 HELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALTSH 92
               D LVLW+    V  S   +VT+++L ++  ++L  H
Sbjct: 90  SHSLDGLVLWNRSGTVDTSDRLDVTSTLLVSTVGSSLLWH 129


>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
           Methanopyrus kandleri|Rep: Zn-ribbon containing protein
           - Methanopyrus kandleri
          Length = 87

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 24/80 (30%), Positives = 35/80 (43%)
 Frame = +2

Query: 86  RNMTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASV 265
           RN  RK R+G +    RG    V C  C   VP+ KAI       I +    + ++D  V
Sbjct: 3   RNPRRKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAIPWTQGFRITDPVVRQAVDDRYV 62

Query: 266 YPMFQLPKLYAKLHYCVSCA 325
           +   +      K++YC  CA
Sbjct: 63  HTFSR------KVYYCPKCA 76


>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
           NEQ043 - Nanoarchaeum equitans
          Length = 84

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = +2

Query: 146 KAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 325
           K VRC  C R +PK+KA   +   N+       ++++  V  +F   +   K++ C SCA
Sbjct: 11  KTVRCYYCGRILPKEKAYVIYTKPNV-----AGELSENEVIAVFSQKR---KIYVCPSCA 62

Query: 326 IHSKVVRNRSK 358
            H  +  +R +
Sbjct: 63  RHRGIKDHRKE 73


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,975,446
Number of Sequences: 1657284
Number of extensions: 8812679
Number of successful extensions: 18981
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 18353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18939
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -