Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G10
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0378 + 3360215-3360253,3360326-3360437,3362176-3362213,336...    29   6.5  
07_03_1727 + 29068348-29068571,29069473-29069514,29069593-290698...    28   8.6  

>08_01_0378 +
           3360215-3360253,3360326-3360437,3362176-3362213,
           3363949-3363966,3364629-3364847,3364937-3366727,
           3367764-3367827,3367915-3367975,3368685-3368694
          Length = 783

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = -3

Query: 234 SHFLNFLEELPPGLGSSADRAESQHQREDEAQNTYKIHFTEIL*CRRIQNSNTISFDANA 55
           S  LN   E+P    SS +++ S H      + T K    +++   R   SN    DA  
Sbjct: 162 SEVLNLFREVPSASFSSVNKSSSNHGASRGLEPT-KTEVKDVVILERDSISNGAGKDAKD 220

Query: 54  KNDQNLK 34
            NDQ ++
Sbjct: 221 INDQEME 227


>07_03_1727 +
           29068348-29068571,29069473-29069514,29069593-29069839,
           29069936-29070013,29070551-29070736,29070829-29071126,
           29071775-29072244
          Length = 514

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +3

Query: 171 RRGQRCSRAQVEALQEN*ESGTQRSRWINQSGSSYSRHRA 290
           +RG++ +RA+ EA +E    GT+R+R + +  +    HRA
Sbjct: 384 KRGEQMARAR-EAAREITPEGTERARVVGEEEAGPEHHRA 422


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,556,949
Number of Sequences: 37544
Number of extensions: 238060
Number of successful extensions: 457
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)