Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G09
         (864 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0692 + 19502878-19502920,19505011-19505104,19505196-195052...    35   0.096
10_07_0020 - 11944054-11944653,11944734-11944847,11944917-119449...    33   0.39 
02_02_0584 - 11853149-11853573,11853673-11853787,11853868-118539...    31   1.6  
03_05_0001 - 19386264-19386284,19386446-19386517,19386614-193873...    29   6.3  

>09_04_0692 +
           19502878-19502920,19505011-19505104,19505196-19505227,
           19505833-19506074,19506758-19506994,19508283-19508396
          Length = 253

 Score = 34.7 bits (76), Expect = 0.096
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = +1

Query: 592 RSYKCITPILIASYYEGLSSFVSDLSLGLYNNTYIVYXXLPVKVPANCKFMYVTASDXMX 771
           + Y C  P+ +   +  +   +SDL+   Y   Y+    L V+V ANC+   +  +D + 
Sbjct: 143 KPYICTMPLKLEDGWNNIQLNLSDLTKRAYGTNYV--ETLRVQVHANCRLRRIYFADRLY 200

Query: 772 RSELIP*D*VLYAXLR 819
             E +P +  LY  ++
Sbjct: 201 SEEELPPEFKLYLPIQ 216


>10_07_0020 -
           11944054-11944653,11944734-11944847,11944917-11944976,
           11945154-11945474,11945556-11945594
          Length = 377

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +2

Query: 305 KPQXDSPAENGDAEESXDASENGDATEKKETGVKRKSVA 421
           KP  D PA +   E++ D  E G+  +KK+T VK+KS A
Sbjct: 96  KPADDLPALDPSIEQALDEEEIGE--DKKKTAVKKKSAA 132


>02_02_0584 -
           11853149-11853573,11853673-11853787,11853868-11853981,
           11854049-11854108,11854265-11854600,11854681-11854724,
           11854776-11855507,11855736-11855921,11856012-11856153,
           11856250-11856300
          Length = 734

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = +2

Query: 305 KPQXDSPAENGDAEESXDASENGD-----ATEKKETGVKRKSVA 421
           KP  D P  +   E++ D    GD     A EKK+T VK+KS A
Sbjct: 466 KPADDLPTLDPSIEQALDEEAIGDEVDQAAAEKKKTAVKKKSAA 509


>03_05_0001 - 19386264-19386284,19386446-19386517,19386614-19387357,
            19387454-19388884,19388953-19389118,19392035-19392114,
            19392393-19392462,19392550-19392761,19392837-19392890,
            19393471-19393623,19393715-19393930,19394029-19394248,
            19394332-19394399,19394510-19394643,19394755-19394854,
            19394943-19395421,19395506-19395699,19396270-19396355,
            19396364-19396444,19396842-19397023,19397305-19397346,
            19398247-19398558,19399374-19399434,19399435-19399617,
            19399744-19399863,19400380-19401051,19402597-19402668,
            19402742-19402865,19403563-19403651,19405023-19405097
          Length = 2170

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 531  YAWFTAMHQCPLEFNSHPHIPLLQMYYTHTDSLI 632
            Y   T   Q PL+F +  H+P LQ Y+   +S++
Sbjct: 2079 YPLNTIQPQVPLQFPNQLHVPQLQFYHQTQESVL 2112


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,517,083
Number of Sequences: 37544
Number of extensions: 192224
Number of successful extensions: 303
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)