Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G05
         (924 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    34   4.5  
UniRef50_Q4QE97 Cluster: Formin, putative; n=3; Leishmania|Rep: ...    28   4.7  
UniRef50_A7BPA8 Cluster: Membrane protein; n=1; Beggiatoa sp. SS...    34   5.9  
UniRef50_Q5C4Q4 Cluster: SJCHGC07055 protein; n=1; Schistosoma j...    34   5.9  
UniRef50_A7SLQ1 Cluster: Predicted protein; n=2; Nematostella ve...    33   7.8  
UniRef50_Q6C9I8 Cluster: Similar to sp|P41832 Saccharomyces cere...    33   7.8  

>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 34.3 bits (75), Expect = 4.5
 Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
 Frame = -1

Query: 498 KKXPLXGGXGGGGXGXEKKK--XPPPRXXGGXF--FFXXPPFLKKXGXFFXWGXP 346
           K  P     GGG    EKKK   PPP   G  F  F+  PP L   G    WG P
Sbjct: 148 KTPPPTHKKGGGPPPREKKKKHPPPPSFVGKKFLLFWGGPPLLFFSGDVLLWGGP 202


>UniRef50_Q4QE97 Cluster: Formin, putative; n=3; Leishmania|Rep:
           Formin, putative - Leishmania major
          Length = 1300

 Score = 28.3 bits (60), Expect(2) = 4.7
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 413 PPXXRGGGXFFFSXPXPPPPXPP 481
           PP  + GG    S P PPPP PP
Sbjct: 612 PPGYKAGGSAS-SAPLPPPPPPP 633



 Score = 24.6 bits (51), Expect(2) = 4.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 455 PXPPPPXPPXRG 490
           P PPPP PP  G
Sbjct: 673 PPPPPPPPPRMG 684


>UniRef50_A7BPA8 Cluster: Membrane protein; n=1; Beggiatoa sp.
           SS|Rep: Membrane protein - Beggiatoa sp. SS
          Length = 225

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 20/38 (52%), Positives = 20/38 (52%)
 Frame = +2

Query: 233 PFFXGXXLFXXFFFXPXPPPXAXXFXLGGPXKKXXFFF 346
           PFF     F      P PPP    F LGG  KK  FFF
Sbjct: 175 PFFSIXXXFPPSPSSPPPPPFXXFFFLGGEKKKRGFFF 212


>UniRef50_Q5C4Q4 Cluster: SJCHGC07055 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC07055 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 106

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 17/38 (44%), Positives = 17/38 (44%)
 Frame = +2

Query: 233 PFFXGXXLFXXFFFXPXPPPXAXXFXLGGPXKKXXFFF 346
           PF  G  L   FFF P  P     F  GGP  K  FFF
Sbjct: 33  PFCGGGFLGPNFFFGPFFPRGGKYFFSGGPRVKFLFFF 70


>UniRef50_A7SLQ1 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1027

 Score = 33.5 bits (73), Expect = 7.8
 Identities = 23/78 (29%), Positives = 24/78 (30%)
 Frame = +2

Query: 257 FXXFFFXPXPPPXAXXFXLGGPXKKXXFFFGXPXXXXXXXXXXXGGXXKKKXPPXXRGGG 436
           F  +F  P PPP         P        G P           GG      PP   GGG
Sbjct: 409 FLFYFSGPPPPPPPPGGVPPPPPPPPPGMGGAPPPPPPPPPGMGGGPPPPPPPPPGPGGG 468

Query: 437 XFFFSXPXPPPPXPPXRG 490
                   PPPP PP  G
Sbjct: 469 P-------PPPPPPPGGG 479


>UniRef50_Q6C9I8 Cluster: Similar to sp|P41832 Saccharomyces
            cerevisiae YNL271c BNI1 regulator of budding; n=1;
            Yarrowia lipolytica|Rep: Similar to sp|P41832
            Saccharomyces cerevisiae YNL271c BNI1 regulator of
            budding - Yarrowia lipolytica (Candida lipolytica)
          Length = 1851

 Score = 33.5 bits (73), Expect = 7.8
 Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
 Frame = +2

Query: 278  PXPPPXAXXFXLGGPXKKXXFFFGXPXXXXXXXXXXXGGXXKKKXPPXXRGGGX--FFFS 451
            P PPP       GGP     F  G P           GG      PP   GG     F  
Sbjct: 1045 PPPPPPPPPMFTGGPPPM--FTGGPPPPPPPPPPGFTGGPP----PPGFTGGPPPPGFTG 1098

Query: 452  XPXPPPPXPP 481
             P PPPP PP
Sbjct: 1099 GPPPPPPPPP 1108


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 332,949,234
Number of Sequences: 1657284
Number of extensions: 4831975
Number of successful extensions: 48881
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43563
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84851082477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)