Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G04
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0499 - 4166891-4166942,4167191-4167510                           30   2.1  
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111...    29   4.9  
08_02_0287 + 15347145-15349604                                         28   8.5  
04_04_1529 + 34176547-34177215,34177280-34177320,34178777-34179053     28   8.5  
04_04_0024 - 22216105-22217856                                         28   8.5  

>05_01_0499 - 4166891-4166942,4167191-4167510
          Length = 123

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -1

Query: 465 PLALRSWLLLWNKLTXPATPSCSPKPGMRVPVRLSPCPFTLSRASP 328
           PLALR   LL N +     PS SP+   +   R  P P + + ASP
Sbjct: 9   PLALRGASLLGNAVAAAVVPSSSPEQQQQQQRRPRPPPGSKNGASP 54


>03_01_0141 +
           1116833-1117082,1117658-1118574,1119417-1119579,
           1119668-1120497,1120562-1120570
          Length = 722

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -3

Query: 415 CDAELLPEAGNAGPGQAQPV 356
           C A LLPE GN G GQ+  V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505


>08_02_0287 + 15347145-15349604
          Length = 819

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 374 RSGSARARLHCPERAPAEAALSLWRSLKSA 285
           RSG   A     ER P + A ++WRSL SA
Sbjct: 673 RSGKLHAAKEFIERMPIKPAAAVWRSLLSA 702


>04_04_1529 + 34176547-34177215,34177280-34177320,34178777-34179053
          Length = 328

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -2

Query: 545 HVVHSAAQRVEVGRVGNGAGRVPDRERPWRSGRG 444
           HV+H     VE G  G G G      RP R  RG
Sbjct: 97  HVIHRIIDAVEEGSGGGGGGGAGPPRRPPRRRRG 130


>04_04_0024 - 22216105-22217856
          Length = 583

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +2

Query: 596 QPE*LLGRG*AEPVPISVQLARXXXPASRSLIRLFTDLRGXPMWDSPSRNSSKSIM 763
           +P  L G    +P P++   A    P + S + +FT L   P+  +PS +S + I+
Sbjct: 96  RPRHLPGFRRIDPSPLAAAAALRLAPCASSALAVFTALHCSPLSITPSAHSCQQII 151


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,372,342
Number of Sequences: 37544
Number of extensions: 400375
Number of successful extensions: 1263
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)