Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G04
         (873 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.99 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.99 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   0.99 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    27   0.99 
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   4.0  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   5.3  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   7.0  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 434 HNNNHDLSAKGVRDQELAQRHSQRAQLQHAGRRSGLHVQTE 556
           +NNN+ L    +RD+EL + H Q  +LQ   ++   H Q +
Sbjct: 219 NNNNNSLHHGPLRDKELTE-HEQLERLQQQQQQQTHHQQQQ 258


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 434 HNNNHDLSAKGVRDQELAQRHSQRAQLQHAGRRSGLHVQTE 556
           +NNN+ L    +RD+EL + H Q  +LQ   ++   H Q +
Sbjct: 219 NNNNNSLHHGPLRDKELTE-HEQLERLQQQQQQQTHHQQQQ 258


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 434 HNNNHDLSAKGVRDQELAQRHSQRAQLQHAGRRSGLHVQTE 556
           +NNN+ L    +RD+EL + H Q  +LQ   ++   H Q +
Sbjct: 171 NNNNNSLHHGPLRDKELTE-HEQLERLQQQQQQQTHHQQQQ 210


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 434 HNNNHDLSAKGVRDQELAQRHSQRAQLQHAGRRSGLHVQTE 556
           +NNN+ L    +RD+EL + H Q  +LQ   ++   H Q +
Sbjct: 219 NNNNNSLHHGPLRDKELTE-HEQLERLQQQQQQQTHHQQQQ 258


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 520 RWAAEWTTCSNRRWAHR 570
           +W AE  T  + RWAHR
Sbjct: 880 QWDAEADTSRHTRWAHR 896


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 511 TSTRWAAEWTTCSNRRWAHR 570
           T  RW  EW    + RW +R
Sbjct: 850 TMERWQREWDESVHGRWTYR 869


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +1

Query: 481 TRPAPFPTRPTSTR-WAAEWTTCSNRRWAH 567
           T  A   +R  S R W  EW+   N RW +
Sbjct: 896 TETAKKASRQASMRQWQNEWSNSLNGRWTY 925


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,597
Number of Sequences: 2352
Number of extensions: 13127
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)