Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_G04
(873 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4) precu... 32 2.4
D80001-1|BAA11496.1| 762|Homo sapiens KIAA0179 protein. 32 3.1
BC028386-1|AAH28386.1| 758|Homo sapiens ribosomal RNA processin... 32 3.1
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 31 5.5
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 31 5.5
BC025998-1|AAH25998.1| 605|Homo sapiens family with sequence si... 31 7.2
BC025409-1|AAH25409.1| 605|Homo sapiens family with sequence si... 31 7.2
BC025397-1|AAH25397.1| 605|Homo sapiens family with sequence si... 31 7.2
BC022035-1|AAH22035.1| 605|Homo sapiens family with sequence si... 31 7.2
AY973323-1|AAY41236.1| 605|Homo sapiens HSD-51 protein. 31 7.2
AK057543-1|BAB71526.1| 605|Homo sapiens protein ( Homo sapiens ... 31 7.2
BC028195-1|AAH28195.1| 182|Homo sapiens chromosome 12 open read... 30 9.5
>AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4)
precursor protein-binding, family A, member 3 variant
protein.
Length = 337
Score = 32.3 bits (70), Expect = 2.4
Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 3/106 (2%)
Frame = -1
Query: 633 GSAYPRPSSHSG**RQSAPRSTMRPPSV*TCSPLRRPXXXXXXXXXXXXXXXXXRTPLAL 454
G PRP + R + + +PP + + PL P +L
Sbjct: 191 GIVRPRPLAPGWGGRAALSTAPEQPPPL-SRPPLFSPRSAASSVVASPSVGASASATASL 249
Query: 453 RSWLLLWNKLTXPATPSCSPKPGMRVPVRLSPCPFTLS---RASPC 325
RS +W PA+ SCSP+P R R P S R+SPC
Sbjct: 250 RSMGRVWWPRHTPASSSCSPRPMARCISRRCQLPHIASLQARSSPC 295
>D80001-1|BAA11496.1| 762|Homo sapiens KIAA0179 protein.
Length = 762
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 586 LTSSTGMTTRPGVS*TCSDLRPARSXXXAGFKKFDTPF 699
L S G G S TCS L+ + + F KFDTPF
Sbjct: 616 LESEAGQPQALGSSGTCSSLKKQKLRAESDFVKFDTPF 653
>BC028386-1|AAH28386.1| 758|Homo sapiens ribosomal RNA processing 1
homolog B (S. cerevisiae) protein.
Length = 758
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 586 LTSSTGMTTRPGVS*TCSDLRPARSXXXAGFKKFDTPF 699
L S G G S TCS L+ + + F KFDTPF
Sbjct: 612 LESEAGQPQALGSSGTCSSLKKQKLRAESDFVKFDTPF 649
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -1
Query: 465 PLALRSWLLLWNKLTXPATPSCSPKPGMRVPVRLSPCP 352
P L S L + + + P TP+ S KP PVRLSP P
Sbjct: 1083 PQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAP 1120
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -1
Query: 465 PLALRSWLLLWNKLTXPATPSCSPKPGMRVPVRLSPCP 352
P L S L + + + P TP+ S KP PVRLSP P
Sbjct: 886 PQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAP 923
>BC025998-1|AAH25998.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 ARRQAGSFTVNSDGTSGAALKVPLTGNDKNVLSAIGSADFNDRHKLSAASAGA-RSGQCK 351
++ AG+ ++S+G S A + T + S G+A + LSAA AG+ + +C
Sbjct: 327 SKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAGSITTSKCA 386
Query: 352 RARAE 366
R E
Sbjct: 387 AERTE 391
>BC025409-1|AAH25409.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 ARRQAGSFTVNSDGTSGAALKVPLTGNDKNVLSAIGSADFNDRHKLSAASAGA-RSGQCK 351
++ AG+ ++S+G S A + T + S G+A + LSAA AG+ + +C
Sbjct: 327 SKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAGSITTSKCA 386
Query: 352 RARAE 366
R E
Sbjct: 387 AERTE 391
>BC025397-1|AAH25397.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 ARRQAGSFTVNSDGTSGAALKVPLTGNDKNVLSAIGSADFNDRHKLSAASAGA-RSGQCK 351
++ AG+ ++S+G S A + T + S G+A + LSAA AG+ + +C
Sbjct: 327 SKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAGSITTSKCA 386
Query: 352 RARAE 366
R E
Sbjct: 387 AERTE 391
>BC022035-1|AAH22035.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 ARRQAGSFTVNSDGTSGAALKVPLTGNDKNVLSAIGSADFNDRHKLSAASAGA-RSGQCK 351
++ AG+ ++S+G S A + T + S G+A + LSAA AG+ + +C
Sbjct: 327 SKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAGSITTSKCA 386
Query: 352 RARAE 366
R E
Sbjct: 387 AERTE 391
>AY973323-1|AAY41236.1| 605|Homo sapiens HSD-51 protein.
Length = 605
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 ARRQAGSFTVNSDGTSGAALKVPLTGNDKNVLSAIGSADFNDRHKLSAASAGA-RSGQCK 351
++ AG+ ++S+G S A + T + S G+A + LSAA AG+ + +C
Sbjct: 327 SKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAGSITTSKCA 386
Query: 352 RARAE 366
R E
Sbjct: 387 AERTE 391
>AK057543-1|BAB71526.1| 605|Homo sapiens protein ( Homo sapiens
cDNA FLJ32981 fis, clone TESTI3000002, weakly similar to
L.mexicana lmsap2 gene for secreted acid phosphatase 2
(SAP2). ).
Length = 605
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 ARRQAGSFTVNSDGTSGAALKVPLTGNDKNVLSAIGSADFNDRHKLSAASAGA-RSGQCK 351
++ AG+ ++S+G S A + T + S G+A + LSAA AG+ + +C
Sbjct: 327 SKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAGSITTSKCA 386
Query: 352 RARAE 366
R E
Sbjct: 387 AERTE 391
>BC028195-1|AAH28195.1| 182|Homo sapiens chromosome 12 open reading
frame 33 protein.
Length = 182
Score = 30.3 bits (65), Expect = 9.5
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 9/70 (12%)
Frame = -2
Query: 536 HSAAQRVEVGRVGNGAGRV---------PDRERPWRSGRGCCCGTNXXXXXXXXXXXXRE 384
HSAA E G +G G+G V P R+R G C G +
Sbjct: 104 HSAAAAGESGDIGPGSGAVEAPGRGARRPTRQREDGGGAVGCFGVSRHRGREAQMSHSSH 163
Query: 383 CGSRSGSARA 354
CGSRS SA A
Sbjct: 164 CGSRSCSAAA 173
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,107,346
Number of Sequences: 237096
Number of extensions: 1959289
Number of successful extensions: 7876
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7874
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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