Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G01
         (850 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_579| Best HMM Match : No HMM Matches (HMM E-Value=.)               140   2e-33
SB_55396| Best HMM Match : Sod_Cu (HMM E-Value=1.5e-07)                60   2e-09
SB_580| Best HMM Match : No HMM Matches (HMM E-Value=.)                48   1e-05
SB_51387| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.7  
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  

>SB_579| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 154

 Score =  140 bits (338), Expect = 2e-33
 Identities = 61/115 (53%), Positives = 79/115 (68%)
 Frame = +1

Query: 247 GLPPGXYGFHVHXXGXLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGXLGNVVFDENHYSR 426
           GL  G +GFH+H  G  + GCVS G HFNP  K+HG P+D NRHVG LGNVV  ++  + 
Sbjct: 36  GLKAGNHGFHIHVYGDNTNGCVSAGPHFNPFKKEHGGPSDENRHVGDLGNVVAGDDGKAC 95

Query: 427 IXLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRKTGXAGGRVACGVIGI 591
           I + D  ++L G H ++GR+VV+H   DD G+  H DS+ TG AGGR+ACGVIGI
Sbjct: 96  IDMTDALVTLVGEHSVVGRSVVVHADEDDLGRGGHEDSKTTGHAGGRLACGVIGI 150


>SB_55396| Best HMM Match : Sod_Cu (HMM E-Value=1.5e-07)
          Length = 100

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 28/70 (40%), Positives = 41/70 (58%)
 Frame = +1

Query: 376 HVGXLGNVVFDENHYSRIXLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRKTGX 555
           HVG LGN++ ++N  +     D  + +     IIGRA+V+H   DD G+  H  S+ TG 
Sbjct: 1   HVGDLGNIIANQNGRATFRFEDKTVKV---WDIIGRAIVVHADEDDLGRGGHELSKSTGN 57

Query: 556 AGGRVACGVI 585
           +G RV CG+I
Sbjct: 58  SGARVGCGII 67


>SB_580| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 79

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = +1

Query: 349 HGHPNDVNRHVGXLGNVVFDENHYSRIXLVDDQISLSGPHGIIGRAVV 492
           HG P D +RH+G LGN+  D N  + + + D  +SL+G   IIGR++V
Sbjct: 2   HGAPEDKDRHLGDLGNIEADANGIADVSITDCLVSLTGQCSIIGRSLV 49


>SB_51387| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 214

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 412 NHYSRIXLVDDQISLSGPHGIIG-RAVVLHEKADDYGKSDHP 534
           NH+S   L   + +L GP+   G R +++++K D Y K D P
Sbjct: 111 NHHSTGILKCQRANLKGPNLCAGKRRILIYDKYDKYDKYDFP 152


>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 794

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +1

Query: 319 GSHFNPEHKDHGHPNDVNRHVGXLGNVVFDENHYSRIXLVDDQIS 453
           G+H N  H    HP++V+     L  V   +N  S +   D+Q S
Sbjct: 617 GNHLNTVHTPDNHPSNVHTPDNHLNTVHTPDNQPSTVHTPDNQPS 661


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,682,714
Number of Sequences: 59808
Number of extensions: 265045
Number of successful extensions: 1118
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)