Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_G01
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...   155   2e-39
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           83   1e-17
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           78   4e-16
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   1.7  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score =  155 bits (375), Expect = 2e-39
 Identities = 67/116 (57%), Positives = 82/116 (70%)
 Frame = +1

Query: 247 GLPPGXYGFHVHXXGXLSGGCVSTGSHFNPEHKDHGHPNDVNRHVGXLGNVVFDENHYSR 426
           GL PG +GFH+H  G L+ GC STG H+NP+   HG PND  RHVG LGN+  DEN  ++
Sbjct: 56  GLTPGKHGFHIHEKGDLTDGCASTGGHYNPDKVSHGAPNDQVRHVGDLGNIAADENGIAK 115

Query: 427 IXLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRKTGXAGGRVACGVIGIL 594
               D  +SL G   +IGRA+V+H + DD GK++HPDS KTG AGGRVACGVIGIL
Sbjct: 116 TSYSDTVVSLYGARSVIGRAIVIHAEVDDLGKTNHPDSLKTGNAGGRVACGVIGIL 171


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 83.0 bits (196), Expect = 1e-17
 Identities = 35/88 (39%), Positives = 54/88 (61%)
 Frame = +1

Query: 328 FNPEHKDHGHPNDVNRHVGXLGNVVFDENHYSRIXLVDDQISLSGPHGIIGRAVVLHEKA 507
           +NP+  DHG P+D N HVG LGN+V      ++I + + +++L G   IIGR + + E  
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNIVAYSTGLAKIQIANKKLTLVGDRSIIGRTLSISEYE 60

Query: 508 DDYGKSDHPDSRKTGXAGGRVACGVIGI 591
           DD G+  H  S+ TG +G  +AC +IG+
Sbjct: 61  DDLGRGKHDYSKTTGNSGNCIACAIIGV 88


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 77.8 bits (183), Expect = 4e-16
 Identities = 34/72 (47%), Positives = 48/72 (66%)
 Frame = +1

Query: 376 HVGXLGNVVFDENHYSRIXLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRKTGX 555
           H G +GN+V DEN  +++ L   QI+LSG   ++GR++V+H   DD G   H  S+ TG 
Sbjct: 1   HAGDMGNIVADENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTTGD 60

Query: 556 AGGRVACGVIGI 591
           AG R+ACGVIG+
Sbjct: 61  AGARLACGVIGL 72


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 259 GXYGFHVHXXGXLSGGCVSTGSHFNPEHKDHGHPNDVN 372
           G Y  +    G  SGG  S  SH +P H   G  + VN
Sbjct: 453 GDYMNNCLQSGYFSGGFSSLHSHHSPHHVSPGMGSTVN 490


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,814
Number of Sequences: 2352
Number of extensions: 8397
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)