Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_F23
         (899 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)              66   5e-11
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)              51   1e-06
SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40)             45   7e-05
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   7e-04
SB_39190| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   7e-04

>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 859

 Score = 65.7 bits (153), Expect = 5e-11
 Identities = 32/69 (46%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = +2

Query: 74  CLCFFVAFASGYVDKG---SPPQWSQYTQ*RDSLNIPYAELHEPFYAWYDSKXSXSRIDY 244
           CL  FVA +S         +PP W Q       L +PYAE+ EPF AW+D     SRIDY
Sbjct: 318 CLLVFVALSSSLAKPTGLKTPPTWPQEYTLTGVLRLPYAEIEEPFQAWFDGGRKRSRIDY 377

Query: 245 YGGMVXTYQ 271
           YGGM  T+Q
Sbjct: 378 YGGMDSTFQ 386


>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1512

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 20/36 (55%), Positives = 24/36 (66%)
 Frame = +2

Query: 164 LNIPYAELHEPFYAWYDSKXSXSRIDYYGGMVXTYQ 271
           L++PY ++ EPF  WY      SRIDYYGGM  TYQ
Sbjct: 45  LSLPYGDIKEPFEVWYSGLHGMSRIDYYGGMDRTYQ 80



 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = +2

Query: 164  LNIPYAELHEPFYAWYDSKXSXSRIDYYGGMVXTYQ 271
            L +P +E++EPF  W+    + SRIDYYGG V TYQ
Sbjct: 908  LRLPTSEVNEPFEIWFSRPHNQSRIDYYGGDVKTYQ 943


>SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40)
          Length = 1198

 Score = 45.2 bits (102), Expect = 7e-05
 Identities = 18/37 (48%), Positives = 25/37 (67%)
 Frame = +2

Query: 161  SLNIPYAELHEPFYAWYDSKXSXSRIDYYGGMVXTYQ 271
            +L++PY  + EPF +WY    + SRIDYY GM  T+Q
Sbjct: 1025 TLHLPYDNIREPFESWYARDYNMSRIDYYYGMDKTFQ 1061



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 18/33 (54%), Positives = 23/33 (69%)
 Frame = +2

Query: 161 SLNIPYAELHEPFYAWYDSKXSXSRIDYYGGMV 259
           +L++PY E+ EPF AWY    + SRIDYY G V
Sbjct: 883 TLSLPYDEIVEPFEAWYAGDYNMSRIDYYYGKV 915


>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 706

 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 15/36 (41%), Positives = 25/36 (69%)
 Frame = +2

Query: 164 LNIPYAELHEPFYAWYDSKXSXSRIDYYGGMVXTYQ 271
           L +P++++ EPF  W+ ++ + SRIDYY G   T+Q
Sbjct: 58  LQLPHSKIEEPFEVWFSAQHNRSRIDYYYGTDRTFQ 93


>SB_39190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 149

 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +2

Query: 161 SLNIPYAELHEPFYAWYDSKXSXSRIDYYGG 253
           +L++PY E+ EPF AWY    + SRIDYY G
Sbjct: 77  TLSLPYDEIVEPFEAWYAGDYNMSRIDYYYG 107


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,942,090
Number of Sequences: 59808
Number of extensions: 202174
Number of successful extensions: 337
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)