Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_F22
         (949 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0234 + 15187065-15188241,15188316-15188494                       51   2e-06
04_03_0649 - 18402976-18403220,18403305-18404499                       43   4e-04
10_08_0009 + 14075929-14076789                                         33   0.33 
01_07_0025 + 40565296-40565497,40565591-40566075                       29   5.4  

>11_04_0234 + 15187065-15188241,15188316-15188494
          Length = 451

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = +3

Query: 393 TSLKAKYPGLTV--LLSVGGDADTEEPEK--YNLLLESQQARTAFINSGVLLAEQYGFDG 560
           +S+K+   G  V  +LS+G D   E+     ++ +   +  R AFINS + LA   GFDG
Sbjct: 98  SSIKSSGGGFAVKTILSIGTDEFREDVSNAAFSRMASEKNLRRAFINSSIELARANGFDG 157

Query: 561 IDLAWQFP 584
           +DLAW+FP
Sbjct: 158 LDLAWRFP 165


>04_03_0649 - 18402976-18403220,18403305-18404499
          Length = 479

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
 Frame = +3

Query: 276 SFCTHLLYGYAGIQPXFYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLSVGGD-- 449
           S  THL Y    + P    L+   +        D  RA+   KAK   +  +LS+G    
Sbjct: 62  SMYTHLYYYAVAVHPARRTLLLPPDPAAASLLGDFSRAV---KAKNAAVKTVLSIGRGGG 118

Query: 450 -------ADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFP 584
                  A +     +  +     +R AFI + V +A + GFDG+D+AW+FP
Sbjct: 119 AGGAAAVAGSGSDPAFAAMAADPASRAAFIGAAVKVARENGFDGLDVAWRFP 170


>10_08_0009 + 14075929-14076789
          Length = 286

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +3

Query: 387 AITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVL----LAEQYGF 554
           A+ + KA +P L+V+L++GGD  T +    N       +  A++ +       L + YG 
Sbjct: 70  AVAAAKAAHPNLSVILALGGD--TVQNTGVNATFAPTSSVDAWVRNAADSVSGLIDAYGL 127

Query: 555 DGIDLAWQ 578
           DG+D+ ++
Sbjct: 128 DGVDVDYE 135


>01_07_0025 + 40565296-40565497,40565591-40566075
          Length = 228

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 674 LLIDWXXAECVLNSMPKRSXXRADLXRLNSWELPGE 567
           LL+ +   + +   +P      ADL RL+ W+LPGE
Sbjct: 34  LLLHYLRRKVMSRPLPADVIPVADLARLHPWDLPGE 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,682,664
Number of Sequences: 37544
Number of extensions: 340392
Number of successful extensions: 747
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)