Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP04_F_F22
(949 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 51 1e-06
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 48 7e-06
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 47 2e-05
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 47 2e-05
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 47 2e-05
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 42 6e-04
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 41 0.001
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 41 0.001
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 38 0.007
At2g19640.2 68415.m02295 SET domain-containing protein contains ... 29 3.4
At2g19640.1 68415.m02294 SET domain-containing protein contains ... 29 3.4
At5g40470.1 68418.m04908 expressed protein 29 4.5
At2g33210.1 68415.m04069 chaperonin, putative similar to SWISS-P... 29 4.5
At1g61810.1 68414.m06972 glycosyl hydrolase family 1 protein con... 29 4.5
At5g18820.1 68418.m02236 chaperonin, putative similar to SWISS-P... 29 6.0
At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containi... 28 7.9
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +3
Query: 276 SFCTHLLYGYAGIQPXFYKLVSLNENLDIDRTHDNYRAIT-SLKAKYPGLTVLLSVGGDA 452
S THL +A ++ Y++ N + A T +++ + P + LLS+GG
Sbjct: 26 SLFTHLFCTFADLEAESYEITIATWN------QAPFHAFTETVQQRNPHVKTLLSIGGG- 78
Query: 453 DTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPR 587
+ + + + + +R +FI S + +A YGF G+DL W++PR
Sbjct: 79 -NADKDAFASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPR 122
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 48.4 bits (110), Expect = 7e-06
Identities = 29/101 (28%), Positives = 50/101 (49%)
Frame = +3
Query: 285 THLLYGYAGIQPXFYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLSVGGDADTEE 464
THL +A + P +V + ++ N+ I +K K P + LLS+GG +
Sbjct: 39 THLFCAFADLDPQTNSVVVSGAH---EQEFSNFTKI--VKKKNPHVQTLLSIGGR--NAD 91
Query: 465 PEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPR 587
+ + + +R +FI S + A Y FDG+DL W++P+
Sbjct: 92 KSAFASMASNPTSRKSFIWSAISSARYYRFDGLDLVWKYPK 132
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/105 (27%), Positives = 50/105 (47%)
Frame = +3
Query: 276 SFCTHLLYGYAGIQPXFYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLSVGGDAD 455
S THL +A I Y+++ + N T +++ + P + LLS+GGD
Sbjct: 45 SLFTHLFCAFADINTLTYQVIVSSRNKPKFSTFTQ-----TVRRRNPTVKTLLSIGGDFT 99
Query: 456 TEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRV 590
+ + + +R FI+S + LA GF G+DL W++P +
Sbjct: 100 YNFA--FASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYPSI 142
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +3
Query: 396 SLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAW 575
++K + P + LLS+GG + + + Q+R FI+S + +A GF G+DLAW
Sbjct: 73 TVKIRNPQVKTLLSIGGK--NANNSAFASMASNHQSRKTFIDSWIFIARSNGFHGLDLAW 130
Query: 576 QFP 584
++P
Sbjct: 131 EYP 133
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +3
Query: 396 SLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAW 575
+++ + P + LLS+GG + Y + + +R +FI+S + +A YGF G+DL W
Sbjct: 82 TVQRRNPSVKTLLSIGGGI--ADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDW 139
Query: 576 QFP 584
++P
Sbjct: 140 EYP 142
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 483 LLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPR 587
+ S R +FI S + +A YGFDG+DL W++PR
Sbjct: 1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPR 35
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +3
Query: 396 SLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAW 575
++K K + LLS+GG D ++ ++ S+ R AFI+S + +A + F G+DLAW
Sbjct: 78 TVKEKNTDVQTLLSIGGK-DADKAVLASMASNSKN-RKAFIDSSIDIARKKDFYGLDLAW 135
Query: 576 QFP 584
++P
Sbjct: 136 EYP 138
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +3
Query: 396 SLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAW 575
++K K + LLS+GG D ++ ++ S+ R AFI+S + +A + F G+DLAW
Sbjct: 70 TVKDKNTDVQTLLSIGGK-DADKAVLASMASNSKN-RKAFIDSSIDIARKKDFYGLDLAW 127
Query: 576 QFP 584
++P
Sbjct: 128 EYP 130
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 38.3 bits (85), Expect = 0.007
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +3
Query: 483 LLESQQARTAFINSGVLLAEQYGFDGIDLAWQFP 584
++ ++ +R +FI+S + +A GF G+DLAW++P
Sbjct: 79 IVSNRTSRESFISSSISIARSLGFYGLDLAWEYP 112
>At2g19640.2 68415.m02295 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 398
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -1
Query: 577 CQARSIPS--KPYCSANSTPELMKAVRACCDSSRRLYFSGSSVSASPPTD 434
CQ+ S+ S P C A+ TP L C+S RRL+ S SS + P+D
Sbjct: 75 CQSCSLVSFCSPNCFASHTPWL-------CESLRRLHQSSSSAFSDQPSD 117
>At2g19640.1 68415.m02294 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 341
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -1
Query: 577 CQARSIPS--KPYCSANSTPELMKAVRACCDSSRRLYFSGSSVSASPPTD 434
CQ+ S+ S P C A+ TP L C+S RRL+ S SS + P+D
Sbjct: 75 CQSCSLVSFCSPNCFASHTPWL-------CESLRRLHQSSSSAFSDQPSD 117
>At5g40470.1 68418.m04908 expressed protein
Length = 496
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -1
Query: 634 PCXSDPQXERIXLGLTLGNCQARSIPSKPYCSANSTPELMKAVRACCDSSRRLYFSGSSV 455
PC S R G+T+G +RS + EL+ + +CC + R L F + V
Sbjct: 78 PCLSSLSIYR---GVTIGTTPSRSDEEHLKAETIFSDELISIISSCCFNLRNLCFLINPV 134
Query: 454 SAS 446
S+S
Sbjct: 135 SSS 137
>At2g33210.1 68415.m04069 chaperonin, putative similar to
SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial
precursor (HSP60-2) [Cucurbita maxima]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 585
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 405 AKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVL 533
AK G +L +GG ++TE EK + + ++ A A + G++
Sbjct: 401 AKLSGGVAVLKIGGASETEVSEKKDRVTDALNATKAAVEEGIV 443
>At1g61810.1 68414.m06972 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase (GI:3820531) [Pinus
contorta]; similar to beta-glucosidase GI:804655 from
(Hordeum vulgare)
Length = 520
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Frame = +3
Query: 336 VSLNENLDIDRTHDN----YRAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQA 503
V++ E D++ H + ++ + LK +YP + + ++ G D ++PE + L +
Sbjct: 379 VTIGELTDVNWQHIDPTGFHKMLNYLKDRYPNMPMFITENGFGDLQKPETTDKELLNDTK 438
Query: 504 RTAFINSGVLLAEQYGF-DGIDLAWQF 581
R ++ SG L A Q DG ++ F
Sbjct: 439 RIQYM-SGYLEALQAAMRDGANVKGYF 464
>At5g18820.1 68418.m02236 chaperonin, putative similar to
SWISS-PROT:P08926- RuBisCO subunit binding-protein alpha
subunit, chloroplast precursor (60 kDa chaperonin alpha
subunit, CPN-60 alpha)[Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 575
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 357 DIDRTHDNY--RAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGV 530
D+ T ++Y + I AK G ++ VGG +TE ++ + +++ A A + G+
Sbjct: 383 DLAETDNSYLSKKIAERIAKLTGGVAVIKVGGHTETELEDRKLRIEDAKNATFAAMREGI 442
Query: 531 LLAEQYGFDGIDLAWQFPRVK 593
+ G I L + PR+K
Sbjct: 443 VPGG--GATYIHLLDEIPRIK 461
>At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 551
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 291 LLYGYAGIQPXFYKLVSLNENLDIDRTHDNYRAITS 398
LLYGY+G+ +KL L+ +RT ++ A+ S
Sbjct: 130 LLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLS 165
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,570,894
Number of Sequences: 28952
Number of extensions: 259793
Number of successful extensions: 621
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2275754832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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