Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_F21
         (927 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3HTK2 Cluster: Pherophorin-C5 protein precursor; n=1; ...    35   2.6  
UniRef50_Q3HTK5 Cluster: Pherophorin-C2 protein precursor; n=8; ...    35   3.4  
UniRef50_Q4A2S6 Cluster: Putative membrane protein precursor; n=...    34   5.9  

>UniRef50_Q3HTK2 Cluster: Pherophorin-C5 protein precursor; n=1;
           Chlamydomonas reinhardtii|Rep: Pherophorin-C5 protein
           precursor - Chlamydomonas reinhardtii
          Length = 541

 Score = 35.1 bits (77), Expect = 2.6
 Identities = 21/81 (25%), Positives = 22/81 (27%)
 Frame = +3

Query: 675 PPXXXPPXXXPXXXXRXPXGSPLXXRXSXXPPPXPXXLXXXXXXXPTXXXXXDXXPFXXX 854
           PP   PP   P      P  SP        PPP P          P+        P    
Sbjct: 175 PPPPPPPSPPPPPPPSPPPPSPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPP 234

Query: 855 XFGPPPXPSXXXPXXXPRXXP 917
              PPP P    P   P   P
Sbjct: 235 PSPPPPPPPSPPPPSPPPPSP 255


>UniRef50_Q3HTK5 Cluster: Pherophorin-C2 protein precursor; n=8;
           Chlamydomonadales|Rep: Pherophorin-C2 protein precursor
           - Chlamydomonas reinhardtii
          Length = 853

 Score = 34.7 bits (76), Expect = 3.4
 Identities = 21/81 (25%), Positives = 22/81 (27%)
 Frame = +3

Query: 675 PPXXXPPXXXPXXXXRXPXGSPLXXRXSXXPPPXPXXLXXXXXXXPTXXXXXDXXPFXXX 854
           PP   PP   P      P  SP        PPP P          P+        P    
Sbjct: 268 PPPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPPPPSPPPPSPPPPSPPP 327

Query: 855 XFGPPPXPSXXXPXXXPRXXP 917
              PPP P    P   P   P
Sbjct: 328 PSPPPPPPPSPPPPPPPSPPP 348



 Score = 34.3 bits (75), Expect = 4.5
 Identities = 21/81 (25%), Positives = 22/81 (27%)
 Frame = +3

Query: 675 PPXXXPPXXXPXXXXRXPXGSPLXXRXSXXPPPXPXXLXXXXXXXPTXXXXXDXXPFXXX 854
           PP   PP   P      P  SP        PPP P          P+        P    
Sbjct: 361 PPSPPPPSPPPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPP 420

Query: 855 XFGPPPXPSXXXPXXXPRXXP 917
              PPP P    P   P   P
Sbjct: 421 PSPPPPSPPPPPPPSPPPPPP 441



 Score = 34.3 bits (75), Expect = 4.5
 Identities = 21/81 (25%), Positives = 22/81 (27%)
 Frame = +3

Query: 675 PPXXXPPXXXPXXXXRXPXGSPLXXRXSXXPPPXPXXLXXXXXXXPTXXXXXDXXPFXXX 854
           PP   PP   P      P  SP        PPP P          P+        P    
Sbjct: 475 PPSPPPPSPPPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPP 534

Query: 855 XFGPPPXPSXXXPXXXPRXXP 917
              PPP P    P   P   P
Sbjct: 535 PSPPPPPPPSPPPPSPPPPSP 555


>UniRef50_Q4A2S6 Cluster: Putative membrane protein precursor; n=1;
           Emiliania huxleyi virus 86|Rep: Putative membrane
           protein precursor - Emiliania huxleyi virus 86
          Length = 430

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 22/81 (27%), Positives = 22/81 (27%)
 Frame = +3

Query: 675 PPXXXPPXXXPXXXXRXPXGSPLXXRXSXXPPPXPXXLXXXXXXXPTXXXXXDXXPFXXX 854
           PP   PP   P      P   P     S  PPP P          P         P    
Sbjct: 152 PPPPTPPPPSPSPPPLPPP--PWSPDPSPPPPPSPYMPPPSPPPHPPNQPPPPYPPSQPP 209

Query: 855 XFGPPPXPSXXXPXXXPRXXP 917
            F PPP P    P   P   P
Sbjct: 210 PFSPPPSPPPFSPPPSPPSQP 230


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,663,955
Number of Sequences: 1657284
Number of extensions: 7667061
Number of successful extensions: 10422
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8957
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)