Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP04_F_F21
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1682 - 39130696-39131705,39132355-39132583                       29   6.9  
11_06_0610 - 25449085-25453284                                         28   9.2  

>01_06_1682 - 39130696-39131705,39132355-39132583
          Length = 412

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
 Frame = +2

Query: 674 PPXXXPPXPXXXXXXPXAGXISPLXEGFXXAPP--XXXPPLXXXGP 805
           PP   PP P      P A   SP    F  +PP     PPL    P
Sbjct: 310 PPYKSPPIPPYYFNSPPANHYSPPPYNFGSSPPTYQYSPPLLPKTP 355


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/47 (29%), Positives = 17/47 (36%)
 Frame = +2

Query: 674 PPXXXPPXPXXXXXXPXAGXISPLXEGFXXAPPXXXPPLXXXGPXPH 814
           PP   PP        P +    P  E +  +PP   PP     P PH
Sbjct: 739 PPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPP-EEKSPPPH 784


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,389,470
Number of Sequences: 37544
Number of extensions: 261694
Number of successful extensions: 341
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)